RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ZNF587BE7ETH6 402 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 LGI1O95970 557 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 F12P00748 615 aaPredicted RBP17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ZSWIM7Q19AV6 140 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 SWI5Q1ZZU3 235 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 MST1LQ2TV78 715 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 SLC9B1Q4ZJI4 515 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 PRAMEF8Q5VWM4 474 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 PRAMEF7Q5VXH5 474 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ATG16L1Q676U5 607 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 SERPINA11Q86U17 422 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 C3orf49Q96BT1 292 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ITCHQ96J02 903 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 MAELQ96JY0 434 aaKnown RBP17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ALKBH3Q96Q83 286 aaPredicted RBP17.11■□□□□ 0.33
CXCL3-201ENST00000296026 SPATA9Q9BWV2 254 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ARMC7Q9H6L4 198 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 CACYBPQ9HB71 228 aaKnown RBP17.11■□□□□ 0.33
CXCL3-201ENST00000296026 ZIM2Q9NZV7 527 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 CDC42EP3Q9UKI2 254 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 RAB21Q9UL25 225 aa17.11■□□□□ 0.33
CXCL3-201ENST00000296026 YLPM1P49750 1951 aaKnown RBP17.11■□□□□ 0.33
CXCL3-201ENST00000296026 A0A096LPI6 279 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 A0A0G2JPF8 293 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 TMEM247A6NEH6 219 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 HNRNPCL2B2RXH8 293 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 HNRNPCL3B7ZW38 293 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 HNRNPCL1O60812 293 aaKnown RBP17.1■□□□□ 0.33
CXCL3-201ENST00000296026 NPIPB7O75200 414 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 AHSA1O95433 338 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 FAM157CP0CG43 387 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 HNRNPCL4P0DMR1 293 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 USF1P22415 310 aaPredicted RBP17.1■□□□□ 0.33
CXCL3-201ENST00000296026 C6orf10Q5SRN2 563 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 CYB5R2Q6BCY4 276 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 NIPAL3Q6P499 406 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 MSANTD1Q6ZTZ1 278 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 EPHX4Q8IUS5 362 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 PHC2Q8IXK0 858 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 VPS33AQ96AX1 596 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 SLC38A2Q96QD8 506 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 KCNS3Q9BQ31 491 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 SDR39U1Q9NRG7 319 aaPredicted RBP17.1■□□□□ 0.33
CXCL3-201ENST00000296026 THUMPD1Q9NXG2 353 aaKnown RBP17.1■□□□□ 0.33
CXCL3-201ENST00000296026 RASD1Q9Y272 281 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
CXCL3-201ENST00000296026 OR6C65A6NJZ3 312 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 TMEM229AB2RXF0 380 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 IGHV4-31P0DP07 118 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 ZNF16P17020 682 aaPredicted RBP17.09■□□□□ 0.33
CXCL3-201ENST00000296026 POLR2JP52435 117 aaKnown RBP17.09■□□□□ 0.33
CXCL3-201ENST00000296026 UBE2NP61088 152 aaKnown RBP17.09■□□□□ 0.33
CXCL3-201ENST00000296026 ZNF311Q5JNZ3 666 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 LINGO2Q7L985 606 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 MAVSQ7Z434 540 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 OR9I1Q8NGQ6 314 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 MFSD8Q8NHS3 518 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 STK35Q8TDR2 534 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 BCL2L2Q92843 193 aaPredicted RBP17.09■□□□□ 0.33
CXCL3-201ENST00000296026 SLC25A36Q96CQ1 311 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 SORCS2Q96PQ0 1159 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 OR52B2Q96RD2 323 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 BEX2Q9BXY8 128 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 TMEM160Q9NX00 188 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 FKBP7Q9Y680 259 aa17.09■□□□□ 0.33
CXCL3-201ENST00000296026 FTCDNL1E5RQL4 147 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 NR5A2O00482 541 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 UBDO15205 165 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 UPK3AO75631 287 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 CRYAAP02489 173 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 NUDT7P0C024 238 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 PNMTP11086 282 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 PAX7P23759 505 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 RPS5P46782 204 aaKnown RBP17.08■□□□□ 0.32
CXCL3-201ENST00000296026 SNRPD2P62316 118 aaKnown RBP17.08■□□□□ 0.32
CXCL3-201ENST00000296026 TUBA1BP68363 451 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 TUBA4AP68366 448 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 LSM11P83369 360 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL3-201ENST00000296026 HOXC5Q00444 222 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 TUBA1AQ71U36 451 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 KDM8Q8N371 416 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 TMEM158Q8WZ71 300 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 KATNB1Q9BVA0 655 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 LINC00470Q9BZP3 86 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 CA10Q9NS85 328 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 MXRA5Q9NR99 2828 aa17.08■□□□□ 0.32
CXCL3-201ENST00000296026 ARFGEF3Q5TH69 2177 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 A0A096LPE4 126 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 ARPC4-TTLL3A0A0A6YYG9 625 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 A0A1W2PPZ6 126 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 SERPINF1P36955 418 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 PDLIM4P50479 330 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 NAAAQ02083 359 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 EGR4Q05215 589 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 RGNQ15493 299 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 ANKRD16Q6P6B7 361 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 GTF2H4Q92759 462 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 MAL2Q969L2 176 aa17.07■□□□□ 0.32
CXCL3-201ENST00000296026 ZNF317Q96PQ6 595 aaPredicted RBP17.07■□□□□ 0.32
CXCL3-201ENST00000296026 VRK1Q99986 396 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms