RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PDE7AQ13946 482 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 ERV3-1Q14264 604 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 GPR176Q14439 515 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 RAB30Q15771 203 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 DLEU7Q6UYE1 221 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 TMUB2Q71RG4 321 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 OR52I1Q8NGK6 324 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 BTBD2Q9BX70 525 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 LTB4R2Q9NPC1 389 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 RLIMQ9NVW2 624 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 PLEK2Q9NYT0 353 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 PIAS3Q9Y6X2 628 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM82A0PJX8 343 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 H7C1C5 153 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 PPP1R2P9O14990 202 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 GPRIN2O60269 458 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 KCNK2O95069 426 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 OPRD1P41143 372 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 LCN6P62502 163 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 NICN1Q9BSH3 213 aa15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 LMF2Q9BU23 707 aaKnown RBP15.31■□□□□ 0.04
SH3RF1-201ENST00000284637 A0A0J9YY10 115 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 CDHR4A6H8M9 788 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 EFCAB7A8K855 629 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MED6O75586 246 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TPOP07202 933 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 BMPR1AP36894 532 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MTNR1BP49286 362 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TEKQ02763 1124 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MORN1Q5T089 497 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC35D2Q76EJ3 337 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SPNS2Q8IVW8 549 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 HHIPL1Q96JK4 782 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 CASD1Q96PB1 797 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 KATNB1Q9BVA0 655 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TO15178 435 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 YKT6O15498 198 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 PRKRAO75569 313 aaKnown RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 GPR75O95800 540 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 GPX2P18283 190 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MAKP20794 623 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 OR14L1PQ8NHC6 308 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 PLCXD1Q9NUJ7 323 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 CBLCQ9ULV8 474 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MTHFD2P13995 350 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 CX3CR1P49238 355 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SEC61A1P61619 476 aaKnown RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SEMA3BQ13214 749 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TNK1Q13470 666 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SH2D5Q6ZV89 423 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TEX19Q8NA77 164 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 PLEKHA3Q9HB20 300 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 B4GALT7Q9UBV7 327 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 P2RX6O15547 441 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC22A25Q6T423 547 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 SLIRPQ9GZT3 109 aaKnown RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 NDRG4Q9ULP0 352 aaKnown RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TRDV1A0A1B0GX56 115 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 OTOL1A6NHN0 477 aaPredicted RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TGFBR1P36897 503 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 RABIFP47224 123 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 CRMP1Q14194 572 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 ANKRD34AQ69YU3 496 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 Q6ZSR6 202 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF765Q7L2R6 523 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 NDUFAF7Q7L592 441 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 OR6T1Q8NGN1 323 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 UBTD2Q8WUN7 234 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TM9SF4Q92544 642 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 MALSU1Q96EH3 234 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM43Q9BTV4 400 aa15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 TSPAN10Q9H1Z9 355 aaPredicted RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF629Q9UEG4 869 aaPredicted RBP15.3■□□□□ 0.04
SH3RF1-201ENST00000284637 A0A1W2PS29 197 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 P04436 131 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 CLDN20P56880 219 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 DPY19L4Q7Z388 723 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 INSM2Q96T92 566 aaPredicted RBP15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 MED17Q9NVC6 651 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 SIDT1Q9NXL6 827 aaKnown RBP15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 A0A0B4J2A0 478 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 GIPP09681 153 aaPredicted RBP15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 RAC2P15153 192 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 SERPINA2P20848 420 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 LTB4RQ15722 352 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 MCATQ8IVS2 390 aaKnown RBP15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 OR9A4Q8NGU2 314 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 ZNF296Q8WUU4 475 aaPredicted RBP15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 BADQ92934 168 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 TMEM106AQ96A25 262 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 C14orf79Q96F83 325 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 OR14A2Q96R54 314 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 LUZP4Q9P127 313 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 SHPKQ9UHJ6 478 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 OR6C6A6NF89 314 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 CEBPBP17676 345 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 MAGEB1P43366 347 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 SLC14A1Q13336 389 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 FAM111BQ6SJ93 734 aa15.29■□□□□ 0.04
SH3RF1-201ENST00000284637 LILRA3Q8N6C8 439 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms