RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 HNRNPCL4P0DMR1 293 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 CFL1P23528 166 aaKnown RBP17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 DCAF7P61962 342 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 MXD1Q05195 221 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 GNA13Q14344 377 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 EXT1Q16394 746 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 CASP12Q6UXS9 341 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 C16orf47Q6ZP98 133 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 TAGAPQ8N103 731 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 BCORP1Q8N888 145 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 TMEM43Q9BTV4 400 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 KATNB1Q9BVA0 655 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 TSSK6Q9BXA6 273 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 HDHD5Q9BXW7 423 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 SAP130Q9H0E3 1048 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 CALML5Q9NZT1 146 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 WDR45Q9Y484 360 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 OR10H1Q9Y4A9 318 aa17.64■□□□□ 0.41
CDC42EP2-201ENST00000279249 SPTBN4Q9H254 2564 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 FREM2Q5SZK8 3169 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 J3KTA2 159 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 SLC22A5O76082 557 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 PDGFAP04085 211 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 HK1P19367 917 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 TGM4P49221 684 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 NR0B1P51843 470 aaKnown RBP17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 TPBGQ13641 420 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 C17orf47Q8NEP4 570 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 OR8K3Q8NH51 312 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 NUBPLQ8TB37 319 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 M1APQ8TC57 530 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 LRRC20Q8TCA0 184 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 FAM122AQ96E09 287 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 IL4I1Q96RQ9 567 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 MMP25Q9NPA2 562 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 MCUBQ9NWR8 336 aa17.63■□□□□ 0.41
CDC42EP2-201ENST00000279249 CENPVL1A0A0U1RR11 272 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 TO15178 435 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 HPP00738 406 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 PLA2G5P39877 138 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ALDH6A1Q02252 535 aaKnown RBP17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 Q0VFX4 171 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 CLN3Q13286 438 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 CYP27C1Q4G0S4 372 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 HLA-DQA1Q5Y7H0 255 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 C22orf42Q6IC83 251 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 FAM26EQ8N5C1 309 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 LSM14AQ8ND56 463 aaKnown RBP17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 THAP3Q8WTV1 239 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 UPRTQ96BW1 309 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 DNAJC27Q9NZQ0 273 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 SLC23A1Q9UHI7 598 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ADAM30Q9UKF2 790 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 NPIPA5A0A0B4J1W7 369 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 NPIPA7E9PJI5 369 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 WWP2O00308 870 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ZNF354AO60765 605 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 STX11O75558 287 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 NPIPA8P0DM63 369 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 RFX3P48380 749 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 PER3P56645 1201 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 PRR22Q8IZ63 422 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ZNF619Q8N2I2 560 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 OMA1Q96E52 524 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ZNF607Q96SK3 696 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 MRPS18AQ9NVS2 196 aaKnown RBP17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 KCNE5Q9UJ90 142 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 ING4Q9UNL4 249 aa17.62■□□□□ 0.41
CDC42EP2-201ENST00000279249 TMEM129A0AVI4 362 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 FAAHO00519 579 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 ZFAND5O76080 213 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CLEC2LP0C7M8 214 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CTRB1P17538 263 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 WT1P19544 449 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 POU1F1P28069 291 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 SNRPD2P62316 118 aaKnown RBP17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 GPR68Q15743 365 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CTRB2Q6GPI1 263 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CNIH2Q6PI25 160 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CD200R1LQ6Q8B3 271 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 COMTD1Q86VU5 262 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 GPR32P1Q8NGA4 272 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 POLDIP3Q9BY77 421 aaKnown RBP17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 RANBP3Q9H6Z4 567 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 NLKQ9UBE8 527 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 SF3B6Q9Y3B4 125 aaKnown RBP17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 CDH10Q9Y6N8 788 aa17.61■□□□□ 0.41
CDC42EP2-201ENST00000279249 INMT-MINDY4F8WBC2 141 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 GUSBP08236 651 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 RPS4Y1P22090 263 aaKnown RBP17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 APEX1P27695 318 aaKnown RBP17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 EVX1P49640 407 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 WNT4P56705 351 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 MAPK14Q16539 360 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 KLHL22Q53GT1 634 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 MZT2AQ6P582 158 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 OR4M2Q8NGB6 313 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 POLE3Q9NRF9 147 aa17.6■□□□□ 0.41
CDC42EP2-201ENST00000279249 TESQ9UGI8 421 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms