RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 HRASLSQ9HDD0 168 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CMC2Q9NRP2 79 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 NTMQ9P121 344 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 CYB5R1Q9UHQ9 305 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 PFDN2Q9UHV9 154 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ST6GALNAC2Q9UJ37 374 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 ZMIZ1Q9ULJ6 1067 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 PRKAB1Q9Y478 270 aa9.49□□□□□ -0.89
UPF3B-201ENST00000276201 HEATR5BQ9P2D3 2071 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 L7N2F9 121 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 AIPO00170 330 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ABCD4O14678 606 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 AGR2O95994 175 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 TFP02787 698 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 RPN2P04844 631 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ZGLP1P0C6A0 271 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 HOXB1P14653 301 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 PPP3CBP16298 524 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ATF1P18846 271 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 CXCL2P19875 107 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 SPINK2P20155 84 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NT5EP21589 574 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NFYAP23511 347 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 AK4P27144 223 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 PBLDP30039 288 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 GCGRP47871 477 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 PRR5P85299 388 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ILF3Q12906 894 aaKnown RBP eCLIP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 IL10RAQ13651 578 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NR0B2Q15466 257 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ZIC1Q15915 447 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 GUSBP11Q6P575 273 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NKAIN4Q8IVV8 208 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NRMQ8IXM6 262 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 KCT2Q8NC54 265 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 SAMD8Q96LT4 415 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 OR7D2Q96RA2 312 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 DPH7Q9BTV6 452 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 GSDMCQ9BYG8 508 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 MGAT4CQ9UBM8 478 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 PCDHGA1Q9Y5H4 931 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 SLC22A23A1A5C7 686 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 MPTX1A8MV57 137 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 RTCAO00442 366 aaKnown RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 RCBTB2O95199 551 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 THY1P04216 161 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ATP1B1P05026 303 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 HMGN2P05204 90 aaKnown RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 SBK2P0C263 348 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ICAM2P13598 275 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 TRHRP34981 398 aaPredicted RBP9.48□□□□□ -0.89
UPF3B-201ENST00000276201 NCBP2P52298 156 aaKnown RBP eCLIP9.48□□□□□ -0.895e-9■■■■■ 31.9
UPF3B-201ENST00000276201 ZNF85Q03923 595 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 TGM3Q08188 693 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ZNF626Q68DY1 528 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ARL9Q6T311 187 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 DHRS13Q6UX07 377 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 PM20D2Q8IYS1 436 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 BVESQ8NE79 360 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 OR52L1Q8NGH7 329 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 RPS4Y2Q8TD47 263 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 BBS4Q96RK4 519 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 DDOQ99489 341 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 MCHR1Q99705 422 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 DNTTIP1Q9H147 329 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 CTPS2Q9NRF8 586 aa9.48□□□□□ -0.89
UPF3B-201ENST00000276201 ARHGEF17Q96PE2 2063 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 ANKRD20A5PA0PJZ0 165 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 B4DGG1 531 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 TSPAN4O14817 238 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 FMO6PO60774 539 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 SLC2A10O95528 541 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 CH25HO95992 272 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 MT-ND4P03905 459 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 HIST1H2ABP04908 130 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 THBS1P07996 1170 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 TSFMP43897 325 aaKnown RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 DUSP3P51452 185 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 CLDN6P56747 220 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 RAB8AP61006 207 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 TSTA3Q13630 321 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 MPPED2Q15777 294 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 EIPR1Q53HC9 387 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 PLBD1Q6P4A8 553 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 OGFOD3Q6PK18 319 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 Q6ZTK2 550 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 HIST3H2AQ7L7L0 130 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.47□□□□□ -0.89
UPF3B-201ENST00000276201 MOSPD2Q8NHP6 518 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 IFI44Q8TCB0 444 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 THAP4Q8WY91 577 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 NSMAFQ92636 917 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 HIST1H2ACQ93077 130 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 HS6ST2Q96MM7 605 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 OR52D1Q9H346 318 aa9.47□□□□□ -0.89
UPF3B-201ENST00000276201 ADGRL4Q9HBW9 690 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms