RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 C1QL1O75973 258 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 AKR7A3O95154 331 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 PRB1P04280 392 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 TPOP07202 933 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 KLK2P20151 261 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 DAPP51397 102 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 NUP107P57740 925 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 RBPJQ06330 500 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 TRIP10Q15642 601 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 SGCBQ16585 318 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 CHMP1BQ7LBR1 199 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 OAFQ86UD1 273 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 CD163Q86VB7 1156 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 ZNF843Q8N446 348 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 CBR4Q8N4T8 237 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 ATG16L2Q8NAA4 619 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 ADPRHL1Q8NDY3 354 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 OR13C2Q8NGS9 318 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 ZNF417Q8TAU3 575 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
SKP2-201ENST00000274254 EME1Q96AY2 570 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 UCN2Q96RP3 112 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 ZNF587Q96SQ5 575 aaPredicted RBP15.39■□□□□ 0.05
SKP2-201ENST00000274254 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 SMURF2Q9HAU4 748 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 CLCF1Q9UBD9 225 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 SIGLEC7Q9Y286 467 aa15.39■□□□□ 0.05
SKP2-201ENST00000274254 AQP7P3A6NL99 342 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 SOCS2O14508 198 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 WDR1O75083 606 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 PTP4A3O75365 173 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 GABRA1P14867 456 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ENPP1P22413 925 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 PEX2P28328 305 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 GTF2E2P29084 291 aaKnown RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 PTGER4P35408 488 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 COX10Q12887 443 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 PON3Q15166 354 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ANKDD1AQ495B1 522 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ACSF3Q4G176 576 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 OGFRL1Q5TC84 451 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 KDM4DQ6B0I6 523 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZBTB49Q6ZSB9 765 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 H1FNTQ75WM6 255 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 TMEM99Q8N816 258 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 DNAJC9Q8WXX5 260 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZHX1-C8orf76Q96EF9 292 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 RBM4BQ9BQ04 359 aaKnown RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 RBM4Q9BWF3 364 aaKnown RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 CHST11Q9NPF2 352 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 TMEFF2Q9UIK5 374 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 HIF3AQ9Y2N7 669 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZNF175Q9Y473 711 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 CHD6Q8TD26 2715 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 TRAV27A0A087WT01 109 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 UNC119BA6NIH7 251 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 FIGNL2A6NMB9 653 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 PLPP3O14495 311 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 PRRG2O14669 202 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 EI24O14681 340 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 HIST1H2ABP04908 130 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ALPLP05186 524 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZNF26P17031 533 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 GSTM3P21266 225 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 UQCRC1P31930 480 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 DAG1Q14118 895 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZBED5Q49AG3 693 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 LPCAT4Q643R3 524 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZNF585AQ6P3V2 769 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 KLHL17Q6TDP4 642 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 HIST3H2AQ7L7L0 130 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 FNDC9Q8TBE3 224 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 HIST1H2ACQ93077 130 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 SLC29A1Q99808 456 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 UCK2Q9BZX2 261 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 ZNF556Q9HAH1 456 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 MCCC2Q9HCC0 563 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 FANCFQ9NPI8 374 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 TAS2R5Q9NYW4 299 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 KIF17Q9P2E2 1029 aa15.38■□□□□ 0.05
SKP2-201ENST00000274254 MCTS1Q9ULC4 181 aaKnown RBP15.38■□□□□ 0.05
SKP2-201ENST00000274254 IGHV3-15A0A0B4J1V0 119 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 KDM4EB2RXH2 506 aaPredicted RBP15.37■□□□□ 0.05
SKP2-201ENST00000274254 RAMP1O60894 148 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 SYNGR4O95473 234 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 TP53P04637 393 aaPredicted RBP15.37■□□□□ 0.05
SKP2-201ENST00000274254 HOXD4P09016 255 aaPredicted RBP15.37■□□□□ 0.05
SKP2-201ENST00000274254 ALDH3A2P51648 485 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 FXYD6P3P58550 94 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 TLE1Q04724 770 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 PMS2P3Q13401 168 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 SF3B4Q15427 424 aaKnown RBP eCLIP15.37■□□□□ 0.05
SKP2-201ENST00000274254 LRRC36Q1X8D7 754 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 FBXW10Q5XX13 1052 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 ABLIM2Q6H8Q1 611 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 RTL6Q6ICC9 239 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 PPP4R4Q6NUP7 873 aa15.37■□□□□ 0.05
SKP2-201ENST00000274254 PLXDC2Q6UX71 529 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms