RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 RPS26P11Q5JNZ5 115 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 OTUD3Q5T2D3 398 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 ATAD3BQ5T9A4 648 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 ANXA8L1Q5VT79 327 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 CYB5R2Q6BCY4 276 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 OGFOD2Q6N063 350 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 KLHL17Q6TDP4 642 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 COMTD1Q86VU5 262 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 CMIPQ8IY22 773 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 CLIP4Q8N3C7 705 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 OR1K1Q8NGR3 316 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 WDR60Q8WVS4 1066 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.78□□□□□ -1.161e-8■■■■■ 76.2
TPM3-201ENST00000271850 VPS33AQ96AX1 596 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 ARL8AQ96BM9 186 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 FBXO17Q96EF6 278 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 ZHX1-C8orf76Q96EF9 292 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 ALKBH3Q96Q83 286 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 TMEM109Q9BVC6 243 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 ROPN1BQ9BZX4 212 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 ROPN1Q9HAT0 212 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 CRNNQ9UBG3 495 aaPredicted RBP7.78□□□□□ -1.16
TPM3-201ENST00000271850 AMDHD2Q9Y303 409 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 GPR45Q9Y5Y3 372 aa7.78□□□□□ -1.16
TPM3-201ENST00000271850 TMEM129A0AVI4 362 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 CFAP73A6NFT4 308 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 LMX1BO60663 402 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 EIF1BO60739 113 aaKnown RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 ZNF432O94892 652 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 IGLV1-44P01699 117 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 PGRP06401 933 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 CECR9P0C854 216 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 ETFAP13804 333 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 HOXB9P17482 250 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 LBPP18428 481 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 CDH2P19022 906 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 CHI3L1P36222 383 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 HTR3AP46098 478 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 SLC1A6P48664 564 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 RPL14P50914 215 aaKnown RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 HOXC5Q00444 222 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 HGFACQ04756 655 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 BST1Q10588 318 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 GGTLC2Q14390 218 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 ZSWIM7Q19AV6 140 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 FAM120AOSQ5T036 256 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 CREB3L2Q70SY1 520 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 AAED1Q7RTV5 226 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 MAVSQ7Z434 540 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 ZCCHC24Q8N2G6 241 aaKnown RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 C10orf111Q8N326 155 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 KDM8Q8N371 416 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 BCL2L2Q92843 193 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 C3orf49Q96BT1 292 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 DDIT4LQ96D03 193 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 AURKBQ96GD4 344 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 FOXN4Q96NZ1 517 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 SLC38A2Q96QD8 506 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 C19orf24Q9BVV8 132 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 BPESC1Q9GZL8 116 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 PLK3Q9H4B4 646 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 WDR55Q9H6Y2 383 aaPredicted RBP7.77□□□□□ -1.17
TPM3-201ENST00000271850 CHODLQ9H9P2 273 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 B3GAT1Q9P2W7 334 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 UPB1Q9UBR1 384 aa7.77□□□□□ -1.17
TPM3-201ENST00000271850 A0A096LPE4 126 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 ARPC4-TTLL3A0A0A6YYG9 625 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 LRP5LA4QPB2 252 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 BIRC5O15392 142 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 IGKV3-15P01624 115 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 TFPTP0C1Z6 253 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 MYZAPP0CAP1 466 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 EPHA3P29320 983 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 S100A3P33764 101 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 CLNS1AP54105 237 aaKnown RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 PRPS1P60891 318 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 HPCAP84074 193 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 NAAAQ02083 359 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 IFFO1Q0D2I5 559 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 DPY19L1Q2PZI1 675 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 PHYHD1Q5SRE7 291 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 ANKRD16Q6P6B7 361 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 SERPINA11Q86U17 422 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 GPAT4Q86UL3 456 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 LRRC34Q8IZ02 419 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 SLC38A5Q8WUX1 472 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 PANX1Q96RD7 426 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 NAA11Q9BSU3 229 aaPredicted RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 SF3B5Q9BWJ5 86 aaKnown RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 BEX2Q9BXY8 128 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
TPM3-201ENST00000271850 FKRPQ9H9S5 495 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 NOX3Q9HBY0 568 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 CA10Q9NS85 328 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 PARPBPQ9NWS1 579 aa7.76□□□□□ -1.17
TPM3-201ENST00000271850 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.76□□□□□ -1.17
TPM3-201ENST00000271850 ZNF443Q9Y2A4 671 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms