RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 DNAJA3Q96EY1 480 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM200CA6NKL6 621 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 RGNQ15493 299 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 VASNQ6EMK4 673 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 FAM180BQ6P0A1 224 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 CPNE8Q86YQ8 564 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SLC5A8Q8N695 610 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 NPRL2Q8WTW4 380 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 NSUN5Q96P11 429 aaKnown RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 F2RL3Q96RI0 385 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 NPIPA5A0A0B4J1W7 369 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 RAC1P63000 192 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 SLC35A2P78381 396 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM135Q86UB9 458 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 ZMYND19Q96E35 227 aaPredicted RBP11.32□□□□□ -0.6
SRRM4-201ENST00000267260 B3GAT1Q9P2W7 334 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 FBXL2Q9UKC9 423 aa11.32□□□□□ -0.6
SRRM4-201ENST00000267260 TUBAL3A6NHL2 446 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 TMX2-CTNND1H3BSU7 103 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 FGF18O76093 207 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 HHEXQ03014 270 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 GAB1Q13480 694 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CPZQ66K79 652 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 KCTD11Q693B1 232 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 OR11L1Q8NGX0 322 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 NETO1Q8TDF5 533 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SLC6A20Q9NP91 592 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 APOBEC3BQ9UH17 382 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 DDAH2O95865 285 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 WDR5P61964 334 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RAB1AP62820 205 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SHC2P98077 582 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RNGTTO60942 597 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CHRM4P08173 479 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 FOLR3P41439 243 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CDKN2DP55273 166 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM130Q8N3G9 435 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SFXN2Q96NB2 322 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 VAMP8Q9BV40 100 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM59Q9BXS4 323 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 C4AP0C0L4 1744 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 C4BP0C0L5 1744 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF217O75362 1048 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SOD2P04179 222 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 FGF4P08620 206 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 HNRNPA2B1P22626 353 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 GPR17Q13304 367 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM163Q8TC26 289 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RCE1Q9Y256 329 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 NFS1Q9Y697 457 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CA12O43570 354 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 HEXAP06865 529 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 FDXRP22570 491 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 EMP2P54851 167 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 NXF5Q9H1B4 397 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 MTCH1Q9NZJ7 389 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SCO1O75880 301 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 ADH4P08319 380 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 ZNF888P0CJ79 500 aaPredicted RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 ESPNLQ6ZVH7 1005 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 ALG12Q9BV10 488 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 AGPAT4Q9NRZ5 378 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RBFOX1Q9NWB1 397 aaKnown RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 NTF3P20783 257 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 GABRB3P28472 473 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 VIPR2P41587 438 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 DGKZQ13574 1117 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 RPS26P11Q5JNZ5 115 aaPredicted RBP11.31□□□□□ -0.6
SRRM4-201ENST00000267260 C5orf46Q6UWT4 87 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SPHK2Q9NRA0 654 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
SRRM4-201ENST00000267260 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 UBE2G1P62253 170 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 CRMP1Q14194 572 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 TMEM97Q5BJF2 176 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 IL20RBQ6UXL0 311 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 ADGRG3Q86Y34 549 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 GAB3Q8WWW8 586 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 TECTBQ96PL2 329 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
SRRM4-201ENST00000267260 OR5K3A6NET4 321 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 RGS11O94810 467 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
SRRM4-201ENST00000267260 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
SRRM4-201ENST00000267260 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms