RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NOX4Q9NPH5 578 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 SDHAF2Q9NX18 166 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 MYH11P35749 1972 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 NFYAP23511 347 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-201ENST00000264828 KATNB1Q9BVA0 655 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 NOVP48745 357 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 RTL6Q6ICC9 239 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF439Q8NDP4 499 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 PMP2P02689 132 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 TK1P04183 234 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 OPRD1P41143 372 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 OR1D4P47884 311 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 DEFA6Q01524 100 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 MFGE8Q08431 387 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-201ENST00000264828 MPP7Q5T2T1 576 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 RDH10Q8IZV5 341 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 KDM8Q8N371 416 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 OR56B4Q8NH76 319 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 SMAP2Q8WU79 429 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-201ENST00000264828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL5A3-201ENST00000264828 PCDHB10Q9UN67 800 aa16.73■□□□□ 0.27
COL5A3-201ENST00000264828 TRPM3Q9HCF6 1732 aaPredicted RBP16.73■□□□□ 0.27
COL5A3-201ENST00000264828 PRKRAO75569 313 aaKnown RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 EDN1P05305 212 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SERPINF1P36955 418 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SLC6A11P48066 632 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 CCR6P51684 374 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 TRA2BP62995 288 aaKnown RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 KCNJ10P78508 379 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 TSPAN31Q12999 210 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 PDE7AQ13946 482 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 HABP2Q14520 560 aaPredicted RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 VHLLQ6RSH7 139 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 KLHL42Q9P2K6 505 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 UGT2A1Q9Y4X1 527 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 RFXAPO00287 272 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 BHLHE40O14503 412 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 ABOP16442 354 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 IL32P24001 234 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 ASB11Q8WXH4 323 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 UBQLN4Q9NRR5 601 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 OR7C1O76099 320 aaPredicted RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SCAF4O95104 1147 aaKnown RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 IKZF1Q13422 519 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 OGFOD3Q6PK18 319 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SECTM1Q8WVN6 248 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SLC41A2Q96JW4 573 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 LMAN1LQ9HAT1 526 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 C1orf123Q9NWV4 160 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 TRAPPC2LQ9UL33 140 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 ANKRD34BA5PLL1 514 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 PRLHRP49683 370 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 CNTN4Q8IWV2 1026 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 OR13C9Q8NGT0 318 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 RHBDD1Q8TEB9 315 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 PATZ1Q9HBE1 687 aaKnown RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 BOLA1Q9Y3E2 137 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 M0QYG6 137 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 MMP12P39900 470 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SLC1A3P43003 542 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 MTCP1P56278 107 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 CLDN17P56750 224 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 LTB4RQ15722 352 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SFXN4Q6P4A7 337 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 LKAAEAR1Q8TD35 194 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 TOE1Q96GM8 510 aaKnown RBP16.72■□□□□ 0.27
COL5A3-201ENST00000264828 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 NRIP3Q9NQ35 241 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 SEMA4GQ9NTN9 838 aa16.72■□□□□ 0.27
COL5A3-201ENST00000264828 ADGRF3Q8IZF5 1079 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 OR5L1Q8NGL2 311 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 GHSRQ92847 366 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 RAB3CQ96E17 227 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 GIPRP48546 466 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 DEFB103AP81534 67 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 ATPAF1Q5TC12 328 aaPredicted RBP16.71■□□□□ 0.27
COL5A3-201ENST00000264828 RNLSQ5VYX0 342 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 SCML1Q9UN30 329 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 HTR2CP28335 458 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 CLINT1Q14677 625 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 PLK5Q496M5 336 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF454Q8N9F8 522 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 CRYGNQ8WXF5 182 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 WASH6PQ9NQA3 447 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 FAM155AB1AL88 458 aaPredicted RBP16.71■□□□□ 0.27
COL5A3-201ENST00000264828 MAKP20794 623 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 MSMO1Q15800 293 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF74Q16587 644 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 CLVS2Q5SYC1 327 aa16.71■□□□□ 0.27
COL5A3-201ENST00000264828 ZNF705AQ6ZN79 300 aaPredicted RBP16.71■□□□□ 0.27
COL5A3-201ENST00000264828 AGAP14A8MT82 685 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 ENSAO43768 121 aaKnown RBP16.71■□□□□ 0.26
COL5A3-201ENST00000264828 TXNDC12O95881 172 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 SCG5P05408 212 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 KIAA0907Q7Z7F0 614 aaPredicted RBP16.71■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM217Q8N7C4 229 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 OR6T1Q8NGN1 323 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 PSORS1C1Q9UIG5 152 aa16.71■□□□□ 0.26
COL5A3-201ENST00000264828 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms