RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ZFAND5O76080 213 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 OLFM2O95897 454 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 RPL13AP40429 203 aaKnown RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 RAB11AP62491 216 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 JAG1P78504 1218 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 DSC1Q08554 894 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 TSPAN31Q12999 210 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 LACC1Q8IV20 430 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 RUNX2Q13950 521 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 FCRLAQ7L513 359 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 FAM174AQ8TBP5 190 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 EMCNQ9ULC0 261 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 GTDC1Q4AE62 458 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 NKX3-1Q99801 234 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 KCNIP2Q9NS61 270 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 BOKQ9UMX3 212 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 SCN4AP35499 1836 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 KDM4EB2RXH2 506 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 CACNG3O60359 315 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 PTGER4P35408 488 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 NR0B2Q15466 257 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 LTB4RQ15722 352 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 ATPAF1Q5TC12 328 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 CPXM2Q8N436 756 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 RHOXF1Q8NHV9 184 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 SIDT1Q9NXL6 827 aaKnown RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 COQ3Q9NZJ6 369 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 F6UZH7 168 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF264O43296 627 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 MDGA1Q8NFP4 955 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC16A7O60669 478 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 CSNK1DP48730 415 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 F2RL1P55085 397 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 LPCAT3Q6P1A2 487 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 OR14A16Q8NHC5 309 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 ANKRD9Q96BM1 317 aaPredicted RBP16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 WIF1Q9Y5W5 379 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 IMPA2O14732 288 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF44P15621 663 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 RAB6CQ53S08 254 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 LYPD4Q6UWN0 246 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 GPR155Q7Z3F1 870 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 MISPQ8IVT2 679 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 KLHDC8BQ8IXV7 354 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 ST7LQ8TDW4 575 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 RAB6CQ9H0N0 254 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 STEAP1Q9UHE8 339 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 MOKQ9UQ07 419 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 TIMP1P01033 207 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 PDE7AQ13946 482 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF684Q5T5D7 378 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 BAGE3Q86Y29 109 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 BAGE2Q86Y30 109 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 FAM109AQ8N4B1 249 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF566Q969W8 418 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 MAP3K3Q99759 626 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 IDUAP35475 653 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF705AQ6ZN79 300 aaPredicted RBP16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 NLRP8Q86W28 1048 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 MEX3DQ86XN8 651 aaKnown RBP16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 METTL17Q9H7H0 456 aaPredicted RBP16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 NRIP3Q9NQ35 241 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 IL37Q9NZH6 218 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 HOXB5P09067 269 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 NFYBP25208 207 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 BTN1A1Q13410 526 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 CLLU1OSQ5K130 101 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 TCTN2Q96GX1 697 aa16.27■□□□□ 0.2
NOTCH3-201ENST00000263388 MAGEB4O15481 346 aaPredicted RBP16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 DBPQ10586 325 aaPredicted RBP16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 SPCS2Q15005 226 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 TP53INP2Q8IXH6 220 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 CLDN22Q8N7P3 220 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 TRBV4-1A0A0J9YWV2 114 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 TRBV11-1A0A0K0K1C0 115 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 MGST1P10620 155 aaKnown RBP16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 RNF151Q2KHN1 245 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 DNAJC5GQ8N7S2 189 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 RAB3CQ96E17 227 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 UBL7Q96S82 380 aaPredicted RBP16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 LAMB2P55268 1798 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM189-UBE2V1I3L0A0 370 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 ZDHHC11BP0C7U3 371 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 OR2A12Q8NGT7 310 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 LILRB4Q8NHJ6 448 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM59Q9BXS4 323 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 C1GALT1Q9NS00 363 aa16.27■□□□□ 0.19
NOTCH3-201ENST00000263388 LRIT2A6NDA9 550 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 OR52A4PA6NMU1 304 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 DDAH2O95865 285 aa16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
NOTCH3-201ENST00000263388 C3orf30Q96M34 536 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms