RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 METTL15A6NJ78 407 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 FAM183AA6NL82 134 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 GPRIN2O60269 458 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 ITGAMP11215 1152 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 OR2I1PQ8NGU4 316 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 CASTOR1Q8WTX7 329 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
CDH1-201ENST00000261769 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 PLXNB2O15031 1838 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.36
CDH1-201ENST00000261769 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 FRG2CA6NGY1 282 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 CBR3O75828 277 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 OR7A10O76100 309 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 KCNK2O95069 426 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 PRKACBP22694 351 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 RNF4P78317 190 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 AKAP1Q92667 903 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDH1-201ENST00000261769 ANKRD60Q9BZ19 345 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 PROCRQ9UNN8 238 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 LINC01387J3KSC0 135 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 J3KTA2 159 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 IFNGR1P15260 489 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 FPR3P25089 353 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 GPR50Q13585 617 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 MOB3CQ70IA8 216 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 PELI3Q8N2H9 469 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 TBC1D15Q8TC07 691 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 SLC35A4Q96G79 324 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
CDH1-201ENST00000261769 NXF5Q9H1B4 397 aaKnown RBP12.83□□□□□ -0.36
CDH1-201ENST00000261769 B3GNT3Q9Y2A9 372 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
CDH1-201ENST00000261769 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 HEXAP06865 529 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 ZNF44P15621 663 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 EVI2BP34910 448 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 S100A10P60903 97 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 SPACA9Q96E40 222 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 NDRG4Q9ULP0 352 aaKnown RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 J3QRK9 145 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 ZNF593O00488 134 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 SSPNQ14714 243 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 FAM57BQ71RH2 274 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 SPRED1Q7Z699 444 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 MRPL41Q8IXM3 137 aaKnown RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 BABAM2Q9NXR7 383 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 DUSP13Q9UII6 198 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 RASD1Q9Y272 281 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 TSPAN12O95859 305 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 GPR176Q14439 515 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 TCTN3Q6NUS6 607 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 TMEM205Q6UW68 189 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 LMF1Q96S06 567 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 CSF3RQ99062 836 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 ZNF696Q9H7X3 374 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 SEMA4GQ9NTN9 838 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 PPT2Q9UMR5 302 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 FUOMA2VDF0 154 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 ACP2P11117 423 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 TBC1D28Q2M2D7 210 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 AKIRIN2Q53H80 203 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 MRGPRX4Q96LA9 322 aa12.82□□□□□ -0.36
CDH1-201ENST00000261769 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
CDH1-201ENST00000261769 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 OR2AT4A6NND4 320 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 H7C417 338 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 ADAM23O75077 832 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 DBHP09172 617 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 MAP2K3P46734 347 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 MAP2K6P52564 334 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 BDH1Q02338 343 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 JMJD6Q6NYC1 403 aaPredicted RBP12.81□□□□□ -0.36
CDH1-201ENST00000261769 GFRALQ6UXV0 394 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 ZNF615Q8N8J6 731 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 OR5H2Q8NGV7 314 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
CDH1-201ENST00000261769 EGLN1Q9GZT9 426 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 PLEKHJ1Q9NW61 149 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 M0R129 80 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 OR2T7P0C7T2 308 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 PET100P0DJ07 73 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 DUSP8Q13202 625 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 PMS2CLQ68D20 193 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 OVCH1Q7RTY7 1134 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 FUNDC1Q8IVP5 155 aa12.81□□□□□ -0.36
CDH1-201ENST00000261769 ZNF709Q8N972 641 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms