RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LHFPL3Q86UP9 236 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 NDNFQ8TB73 568 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 TEAD3Q99594 435 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 TNFRSF10DQ9UBN6 386 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 FBXL2Q9UKC9 423 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 EXOSC1Q9Y3B2 195 aaKnown RBP20.24■□□□□ 0.83
SIX3-201ENST00000260653 IMPA2O14732 288 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 TERTO14746 1132 aaKnown RBP20.24■□□□□ 0.83
SIX3-201ENST00000260653 HPP00738 406 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 C1DQ13901 141 aaKnown RBP20.24■□□□□ 0.83
SIX3-201ENST00000260653 SSX1Q16384 188 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 FAM69AQ5T7M9 428 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 Q96M85 177 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 SECISBP2Q96T21 854 aaKnown RBP20.24■□□□□ 0.83
SIX3-201ENST00000260653 NMNAT3Q96T66 252 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 LRFN3Q9BTN0 628 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 KLHL21Q9UJP4 597 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 CNTRLQ7Z7A1 2325 aa20.24■□□□□ 0.83
SIX3-201ENST00000260653 TEX13CA0A0J9YWL9 993 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 SLC22A31A6NKX4 558 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 IGHA1P01876 353 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 HIST1H2ABP04908 130 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 SCG5P05408 212 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 MSX1P28360 303 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 SH3BGRP55822 239 aaPredicted RBP20.23■□□□□ 0.83
SIX3-201ENST00000260653 CTXN1P60606 82 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 HIST3H2AQ7L7L0 130 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 TMEM156Q8N614 296 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 ZPLD1Q8TCW7 415 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 HIST1H2ACQ93077 130 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 PCDHGB6Q9Y5F9 930 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 LOC101059948A0A1B0GTJ6 334 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 TMEM129A0AVI4 362 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 SLC22A1O15245 554 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 AIREO43918 545 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 RAD1O60671 282 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 CD14P08571 375 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 TSPAN19P0C672 248 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 ZNF41P51814 821 aaPredicted RBP20.23■□□□□ 0.83
SIX3-201ENST00000260653 FAM122BQ7Z309 247 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 WDSUB1Q8N9V3 476 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 OR2M3Q8NG83 312 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 OR51E2Q9H255 320 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 DOCK10Q96BY6 2186 aa20.23■□□□□ 0.83
SIX3-201ENST00000260653 C21orf140B9A014 251 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 J3QRE1 110 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 CCRL2O00421 344 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 BCL10O95999 233 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 CCL3P10147 92 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 TCEA1P23193 301 aaKnown RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 WNT4P56705 351 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 PLPPR5Q32ZL2 321 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 ZNF468Q5VIY5 522 aaPredicted RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 ATCAYQ86WG3 371 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 ARMC10Q8N2F6 343 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 NPEPL1Q8NDH3 523 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 STK35Q8TDR2 534 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 ZNF649Q9BS31 505 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 GPR87Q9BY21 358 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 CPNE5Q9HCH3 593 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 CELSR3Q9NYQ7 3312 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 MRPL3P09001 348 aaKnown RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 CDK4P11802 303 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 ICAM2P13598 275 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 APOBEC1P41238 236 aaKnown RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 ANKDD1AQ495B1 522 aa20.22■□□□□ 0.83
SIX3-201ENST00000260653 SOWAHCQ53LP3 525 aaPredicted RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 B3GNTL1Q67FW5 361 aaPredicted RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 MAMDC2Q7Z304 686 aaPredicted RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 LSM14AQ8ND56 463 aaKnown RBP20.22■□□□□ 0.83
SIX3-201ENST00000260653 MED12Q93074 2177 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 IDH3BO43837 385 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 MT-ATP6P00846 226 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 DLX5P56178 289 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 SLC6A19Q695T7 634 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 ZBTB46Q86UZ6 589 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 TMEM99Q8N816 258 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 PSD4Q8NDX1 1056 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 OR51L1Q8NGJ5 315 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 GATAD2BQ8WXI9 593 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 ARL5BQ96KC2 179 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 HPF1Q9NWY4 346 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 ERVK13-1Q9NX77 482 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 TAS2R5Q9NYW4 299 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 OR6C68A6NDL8 312 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 ETV2O00321 342 aaPredicted RBP20.21■□□□□ 0.83
SIX3-201ENST00000260653 AHSA1O95433 338 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 IL11P20809 199 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 CHAF1BQ13112 559 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 SNTA1Q13424 505 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 C19orf48Q6RUI8 117 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 ATP6V1C2Q8NEY4 427 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 TM9SF4Q92544 642 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 DDOQ99489 341 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 TBX5Q99593 518 aa20.21■□□□□ 0.83
SIX3-201ENST00000260653 COL25A1Q9BXS0 654 aaPredicted RBP20.21■□□□□ 0.83
SIX3-201ENST00000260653 LOC100506127A0A0U1RQW1 187 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 STMND1H3BQB6 276 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 GRPRP30550 384 aa20.2■□□□□ 0.82
SIX3-201ENST00000260653 NBL1P41271 181 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms