RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 A0A1W2PNR3 127 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 HTR3EA5X5Y0 456 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 AHRRA9YTQ3 701 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 PTGER4P35408 488 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 EIF1AXP47813 144 aaKnown RBP18.56■□□□□ 0.56
RTCA-201ENST00000260563 CLK1P49759 484 aaKnown RBP18.56■□□□□ 0.56
RTCA-201ENST00000260563 CLDN15P56746 228 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 SF3B4Q15427 424 aaKnown RBP eCLIP18.56■□□□□ 0.566e-7■■■■□ 22.8
RTCA-201ENST00000260563 HBMQ6B0K9 141 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 C5orf46Q6UWT4 87 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 OR10D3Q8NH80 312 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 TUBA1CQ9BQE3 449 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 RIBC2Q9H4K1 309 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 PAQR5Q9NXK6 330 aaPredicted RBP18.56■□□□□ 0.56
RTCA-201ENST00000260563 ENOPH1Q9UHY7 261 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 HDGFL3Q9Y3E1 203 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 ZC3H12DA2A288 527 aaKnown RBP18.55■□□□□ 0.56
RTCA-201ENST00000260563 EFCAB9A8MZ26 197 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 CDC42EP2O14613 210 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 NPIPB7O75200 414 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 OSMP13725 252 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 CA7P43166 264 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 SGCBQ16585 318 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 DOLPP1Q86YN1 238 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 ZPLD1Q8TCW7 415 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 KTI12Q96EK9 354 aaPredicted RBP18.55■□□□□ 0.56
RTCA-201ENST00000260563 ARL5BQ96KC2 179 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 MBOAT4Q96T53 435 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 ADI1Q9BV57 179 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 GABARAPL3Q9BY60 117 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 REV1Q9UBZ9 1251 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 POLEQ07864 2286 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 DOCK7Q96N67 2140 aa18.55■□□□□ 0.56
RTCA-201ENST00000260563 TRAV36DV7A0A075B6V5 113 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 CLCA1A8K7I4 914 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 STSP08842 583 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 SAGP10523 405 aaPredicted RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 ACVR2AP27037 513 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 RPS5P46782 204 aaKnown RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 MYBPHQ13203 477 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 ACSF3Q4G176 576 aaPredicted RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 C1orf185Q5T7R7 199 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 C1orf140Q5VVS0 124 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 C1QL3Q5VWW1 255 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 PRR7Q8TB68 274 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 DNAJA3Q96EY1 480 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 TRIB1Q96RU8 372 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 TIGARQ9NQ88 270 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 RAB26Q9ULW5 256 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 RELNP78509 3460 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 UNC119BA6NIH7 251 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 CXCL13O43927 109 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 AHSA1O95433 338 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 CH25HO95992 272 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 HOXD4P09016 255 aaPredicted RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 IDUAP35475 653 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 DIO1P49895 249 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 CSNK2A1P68400 391 aaPredicted RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 NPRL3Q12980 569 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 ZNF74Q16587 644 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 EIF2S3LQ2VIR3 472 aaKnown RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 C6orf52Q5T4I8 152 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 C3P1Q6ZMU1 363 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 TMPPEQ6ZT21 453 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 RASSF6Q6ZTQ3 369 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 SLC46A3Q7Z3Q1 461 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 DHRSXQ8N5I4 330 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 C10orf53Q8N6V4 93 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 TAAR8Q969N4 342 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 ZNF845Q96IR2 970 aaPredicted RBP18.54■□□□□ 0.56
RTCA-201ENST00000260563 POTEKPQ9BYX7 375 aa18.54■□□□□ 0.56
RTCA-201ENST00000260563 LRRN3E7EW58 273 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 SULT2B1O00204 365 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 OR7A10O76100 309 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 PMS2P2O95744 297 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 TP53P04637 393 aaPredicted RBP18.53■□□□□ 0.56
RTCA-201ENST00000260563 FUT1P19526 365 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 POLR2IP36954 125 aaKnown RBP18.53■□□□□ 0.56
RTCA-201ENST00000260563 CARD18P57730 90 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 ESRRGP62508 458 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 SLC36A3Q495N2 470 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 B3GNT6Q6ZMB0 384 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 ZNF555Q8NEP9 628 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 CYGBQ8WWM9 190 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 LIPHQ8WWY8 451 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 TFAP2CQ92754 450 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 CPNE4Q96A23 557 aaPredicted RBP18.53■□□□□ 0.56
RTCA-201ENST00000260563 PTDSS2Q9BVG9 487 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 SRXN1Q9BYN0 137 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 GRIP2Q9C0E4 1043 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 FAM118AQ9NWS6 357 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 MCTS1Q9ULC4 181 aaKnown RBP18.53■□□□□ 0.56
RTCA-201ENST00000260563 LRRC42Q9Y546 428 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 FAM215AQ9Y5M1 114 aa18.53■□□□□ 0.56
RTCA-201ENST00000260563 MED12LQ86YW9 2145 aa18.52■□□□□ 0.56
RTCA-201ENST00000260563 H3BN98 237 aa18.52■□□□□ 0.56
RTCA-201ENST00000260563 SOX14O95416 240 aa18.52■□□□□ 0.56
RTCA-201ENST00000260563 BGLAPP02818 100 aa18.52■□□□□ 0.56
RTCA-201ENST00000260563 PLA2G2AP14555 144 aa18.52■□□□□ 0.56
RTCA-201ENST00000260563 CAPGP40121 348 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms