RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ADAM29Q9UKF5 820 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SLC22A13Q9Y226 551 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TOGARAM1Q9Y4F4 1720 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 KCNE1BA0A087WTH5 132 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3DA0A087WVF3 549 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3IA0A087WXS9 549 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3EA0A087X179 549 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 LOC105369274A0A096LPK9 316 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM269A0A1B0GVZ9 245 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3LB9A6J9 549 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 WNT9AO14904 365 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GRM6O15303 877 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SEPT4O43236 478 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SCGNO76038 276 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CNIH1O95406 144 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ALDOAP04075 364 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CST2P09228 141 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GABRB1P18505 474 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 GGT1P19440 569 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SLC2A5P22732 501 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 HTR2CP28335 458 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CNR2P34972 360 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF84P51523 738 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PLAURQ03405 335 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TSNQ15631 228 aaKnown RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CYP51A1Q16850 503 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CBWD3Q5JTY5 395 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CBWD5Q5RIA9 395 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PLCXD3Q63HM9 321 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3CQ6IPX1 549 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PRSS55Q6UWB4 352 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TTLL10Q6ZVT0 673 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SPRED2Q7Z698 418 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 RTN4RL2Q86UN3 420 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 WDR5BQ86VZ2 330 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 PROSER1Q86XN7 944 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TBC1D3Q8IZP1 549 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-201ENST00000258733 OR4N4Q8N0Y3 316 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 FAM58AQ8N1B3 248 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 KDM8Q8N371 416 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 OR10R2Q8NGX6 335 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CYP2W1Q8TAV3 490 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 HPSE2Q8WWQ2 592 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CLEC4DQ8WXI8 215 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM186Q96B77 213 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 REEP6Q96HR9 211 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 S100A13Q99584 98 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 LPAR4Q99677 370 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 CBWD1Q9BRT8 395 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 SYT17Q9BSW7 474 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 TMPRSS13Q9BYE2 586 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 RAB22AQ9UL26 194 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 OR51B4Q9Y5P0 310 aa7.14□□□□□ -1.27
GPNMB-201ENST00000258733 DLEC1Q9Y238 1755 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 LOC102724200A0A096LPH7 203 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ANKUB1A6NFN9 424 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 NEURL1BA8MQ27 555 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF724A8MTY0 619 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF705GA8MUZ8 300 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SMAD7O15105 426 aaKnown RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 GNG7O60262 68 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 TOMM40O96008 361 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 PDYNP01213 254 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 LAMP1P11279 417 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 HSD17B1P14061 328 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 HGFACQ04756 655 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SPOCK1Q08629 439 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 HIF1AQ16665 826 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 TIMM50Q3ZCQ8 353 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 TMEM201Q5SNT2 666 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 RTL6Q6ICC9 239 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SMARCD3Q6STE5 483 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF705AQ6ZN79 300 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR4F6Q8NGB9 312 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR4D5Q8NGN0 318 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 OR1K1Q8NGR3 316 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 M1APQ8TC57 530 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF583Q96ND8 569 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SLC46A1Q96NT5 459 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SELENOIQ9C0D9 397 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SIRT3Q9NTG7 399 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 B3GAT1Q9P2W7 334 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 HSPB7Q9UBY9 170 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 EGFL7Q9UHF1 273 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 TUBD1Q9UJT1 453 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 CORO2BQ9UQ03 480 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 EXO1Q9UQ84 846 aaKnown RBP7.13□□□□□ -1.27
GPNMB-201ENST00000258733 BCORQ6W2J9 1755 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 YJEFN3A6XGL0 299 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 BCKDKO14874 412 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SNAI2O43623 268 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 CTSVO60911 334 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 GPR32O75388 356 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 SCGB2A1O75556 95 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 IFNA5P01569 189 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 JAK3P52333 1124 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 PNLIPRP2P54317 469 aa7.13□□□□□ -1.27
GPNMB-201ENST00000258733 CDH12P55289 794 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms