RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RPS4XP62701 263 aaKnown RBP17.12■□□□□ 0.33
TRIM47-201ENST00000254816 CRMP1Q14194 572 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 B3GNTL1Q67FW5 361 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SIRT6Q8N6T7 355 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 FAM83FQ8NEG4 500 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-201ENST00000254816 OR11A1Q9GZK7 315 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 H2AFY2Q9P0M6 372 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SEC14L4Q9UDX3 406 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 PTPRBP23467 1997 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SCG5P05408 212 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 ASAH2BP0C7U1 165 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SSR4P51571 173 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SPHARQ15513 63 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 ZNF468Q5VIY5 522 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-201ENST00000254816 GHDCQ8N2G8 530 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 SDR9C7Q8NEX9 313 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 OR4F15Q8NGB8 312 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 OR4K13Q8NH42 304 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 PTP4A1Q93096 173 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 PRRX2Q99811 253 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 KCNS3Q9BQ31 491 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 ANKRD10Q9NXR5 420 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 CHRNA9Q9UGM1 479 aa17.12■□□□□ 0.33
TRIM47-201ENST00000254816 ZNF292O60281 2723 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 SNTNA6NMZ2 147 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 TERTO14746 1132 aaKnown RBP17.11■□□□□ 0.33
TRIM47-201ENST00000254816 RAB36O95755 333 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 HPP00738 406 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 PEPDP12955 493 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 HIST1H1CP16403 213 aaKnown RBP17.11■□□□□ 0.33
TRIM47-201ENST00000254816 HK1P19367 917 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 MLF1P58340 268 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 ERVK-25P63136 954 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 KLHL12Q53G59 568 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 KLHL22Q53GT1 634 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 OPN5Q6U736 354 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 SLC37A3Q8NCC5 494 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 OR52E2Q8NGJ4 325 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 TMEM234Q8WY98 164 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 RFKQ969G6 155 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 SLC25A36Q96CQ1 311 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 OR51V1Q9H2C8 321 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 FBXL2Q9UKC9 423 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 BAIAP2Q9UQB8 552 aa17.11■□□□□ 0.33
TRIM47-201ENST00000254816 RIIAD1A6NNX1 92 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 PRR23D1E9PI22 279 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TP53I11O14683 189 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 IMPA2O14732 288 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 UPK1BO75841 260 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 IGF2P01344 180 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 BGLAPP02818 100 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 PRR23D2P0DMB1 279 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 CCL3P10147 92 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 GTF2E2P29084 291 aaKnown RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 S100A5P33763 92 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 ETV1P50549 477 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 GABREP78334 506 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 FOXF1Q12946 379 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 NIPAL3Q6P499 406 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TMEM156Q8N614 296 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TRMT61AQ96FX7 289 aaKnown RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 KATNB1Q9BVA0 655 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 PTDSS2Q9BVG9 487 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 MND1Q9BWT6 205 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 FN3KQ9H479 309 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 IL17BQ9UHF5 180 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 DIMT1Q9UNQ2 313 aaKnown RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 HIF3AQ9Y2N7 669 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TRAV36DV7A0A075B6V5 113 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 STMND1H3BQB6 276 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 SERPINI2O75830 405 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 F13BP05160 661 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 GYPBP06028 91 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 HTR1FP30939 366 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 CD97P48960 835 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 RAB40BQ12829 278 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 TIMM50Q3ZCQ8 353 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 ARHGAP11AQ6P4F7 1023 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 DPY19L2P2Q6ZN68 376 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 LYSMD2Q8IV50 215 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 PARP16Q8N5Y8 322 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 NANOGP1Q8N7R0 232 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 ATP6V1C2Q8NEY4 427 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 LIPHQ8WWY8 451 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 RASD2Q96D21 266 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 SDHAF3Q9NRP4 125 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 MRPS18AQ9NVS2 196 aaKnown RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 CAB39Q9Y376 341 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-201ENST00000254816 MUC6Q6W4X9 2439 aa17.1■□□□□ 0.33
TRIM47-201ENST00000254816 G3V3Y1 287 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ZNF3P17036 446 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 SLC16A1P53985 500 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 SUMO3P55854 103 aaPredicted RBP17.09■□□□□ 0.33
TRIM47-201ENST00000254816 PRPS1P60891 318 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 LIPKQ5VXJ0 399 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 STEAP3Q658P3 488 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 WDSUB1Q8N9V3 476 aa17.09■□□□□ 0.33
TRIM47-201ENST00000254816 FAM98AQ8NCA5 519 aaKnown RBP17.09■□□□□ 0.33
TRIM47-201ENST00000254816 ST8SIA1Q92185 356 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms