RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SORCS2Q96PQ0 1159 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TSPAN11A1L157 253 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 PTHP01270 115 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC2A1P11166 492 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TMEM207Q6UWW9 146 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC35F3Q8IY50 421 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 STEAP2Q8NFT2 490 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 CDCP1Q9H5V8 836 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 A0A1B0GWA3 101 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 CACNG3O60359 315 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 RPL35P42766 123 aaKnown RBP17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 IDH3GP51553 393 aaPredicted RBP17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 SIRT6Q8N6T7 355 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 PFN4Q8NHR9 129 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 OSGIN1Q9UJX0 560 aa17.32■□□□□ 0.36
SMARCC1-201ENST00000254480 TTLL8A6PVC2 850 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 NRG2O14511 850 aaPredicted RBP17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 TUSC2O75896 110 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 KCNK5O95279 499 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 CSNK1G2P78368 415 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 TAZQ16635 292 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC36A2Q495M3 483 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 METAP1DQ6UB28 335 aaPredicted RBP17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 LYPD4Q6UWN0 246 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 MEIOCA2RUB1 952 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 REEP5Q00765 189 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 LAX1Q8IWV1 398 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 OR1E3Q8WZA6 343 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 CNTNAP3BQ96NU0 1288 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 FGF22Q9HCT0 170 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 THAP10Q9P2Z0 257 aaPredicted RBP17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 FAM166BA8MTA8 275 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 SSX2Q16385 188 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 PM20D2Q8IYS1 436 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 POC1BQ8TC44 478 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC37A2Q8TED4 501 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 GHSRQ92847 366 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 GATA6Q92908 595 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 SEC22AQ96IW7 307 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 HRH4Q9H3N8 390 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 KLHL42Q9P2K6 505 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 SURF4O15260 269 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 NPPBP16860 134 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 FZD7O75084 574 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 CARD18P57730 90 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 OR6T1Q8NGN1 323 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 LCORQ96JN0 433 aaPredicted RBP17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 C1orf198Q9H425 327 aa17.31■□□□□ 0.36
SMARCC1-201ENST00000254480 IFNA4P05014 189 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 RAB31Q13636 194 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 HEPHL1Q6MZM0 1159 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 LILRA2Q8N149 483 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 DVL3Q92997 716 aaPredicted RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 MIB2Q96AX9 1013 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SELENOIQ9C0D9 397 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SEMA6CQ9H3T2 930 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 BLACEA4D250 179 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 STK17BO94768 372 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 DDAH2O95865 285 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 MCCD1P59942 119 aaPredicted RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF582Q96NG8 517 aaPredicted RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 CD300AQ9UGN4 299 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 ZNF225Q9UK10 706 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 NME7Q9Y5B8 376 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 MYH4Q9Y623 1939 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 RAB5BP61020 215 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SORDQ00796 357 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 MLLT11Q13015 90 aaPredicted RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SLC14A2Q15849 920 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 VN1R2Q8NFZ6 395 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 GIMAP1Q8WWP7 306 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 PIGTQ969N2 578 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 PFDN5Q99471 154 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SPIN2AQ99865 258 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SPIN2BQ9BPZ2 258 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 TBC1D29Q9UFV1 150 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 TMEM184BQ9Y519 407 aaPredicted RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 ARL6IP1Q15041 203 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 ADAMTSL4Q6UY14 1074 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 NOXA1Q86UR1 476 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SECTM1Q8WVN6 248 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 MUL1Q969V5 352 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 PRRT1Q99946 306 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 HDAC8Q9BY41 377 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 NOX4Q9NPH5 578 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 ZC3H12DA2A288 527 aaKnown RBP17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 SELENOFO60613 162 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 CALCBP10092 127 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 BDH1Q02338 343 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 GDPGP1Q6ZNW5 385 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 DMBX1Q8NFW5 382 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 CENPOQ9BU64 300 aa17.3■□□□□ 0.36
SMARCC1-201ENST00000254480 POM121BA6NF01 834 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 ITGB2P05107 769 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 NUDT1P36639 197 aa17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 CYCSP99999 105 aaKnown RBP17.29■□□□□ 0.36
SMARCC1-201ENST00000254480 PGM2L1Q6PCE3 622 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms