RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 BHLHE41Q9C0J9 482 aaPredicted RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 EPHX3Q9H6B9 360 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 PRDM7Q9NQW5 492 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 CCDC187A0A096LP49 1063 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ACOD1A6NK06 481 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 SURF4O15260 269 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 GLCEO94923 617 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ANXA5P08758 320 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 PNPLA4P41247 253 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 MRPS11P82912 194 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 NFATC2Q13469 925 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ACTBL2Q562R1 376 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 C5orf24Q7Z6I8 188 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 RANBP3LQ86VV4 465 aaPredicted RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 TOP6BLQ8N6T0 577 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR5AK3PQ8NH89 298 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 WFIKKN2Q8TEU8 576 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 TMED6Q8WW62 240 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 EDAQ92838 391 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 AKR1E2Q96JD6 320 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR51I1Q9H343 314 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 FN3KRPQ9HA64 309 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 IL20RAQ9UHF4 553 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 FOXJ3Q9UPW0 622 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 FKTNO75072 461 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 FCGR3AP08637 254 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 DAOP14920 347 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 S1PR1P21453 382 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 FAUP35544 74 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 STXBP1P61764 594 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 ATXN7L3Q14CW9 347 aaPredicted RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 PTRHD1Q6GMV3 140 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 LRRC70Q7Z2Q7 622 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 GLB1L2Q8IW92 636 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ETFBKMTQ8IXQ9 262 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 STEAP2Q8NFT2 490 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR51G2Q8NGK0 314 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 OR4C16Q8NGL9 310 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 MVB12AQ96EY5 273 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 SULT4A1Q9BR01 284 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 ACBD6Q9BR61 282 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 SLITRK2Q9H156 845 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 BPIFA1Q9NP55 256 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 COMMD9Q9P000 198 aa11.99□□□□□ -0.49
MSH2-201ENST00000233146 AK6Q9Y3D8 172 aaKnown RBP11.99□□□□□ -0.49
MSH2-201ENST00000233146 SOCS6O14544 535 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 MAGEB4O15481 346 aaPredicted RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 PPP1R3DO95685 299 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 THBS1P07996 1170 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 GPNMBQ14956 572 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 OR7A5Q15622 319 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 ENPP7Q6UWV6 458 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 MEX3DQ86XN8 651 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 OR13C5Q8NGS8 318 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 TM4SF18Q96CE8 201 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 SAT2Q96F10 170 aaPredicted RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 ZNF385AQ96PM9 386 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 DERL3Q96Q80 235 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 LMAN1LQ9HAT1 526 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 ZNF214Q9UL59 606 aaPredicted RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 MRPS18CQ9Y3D5 142 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 FBXO24O75426 580 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 CH25HO95992 272 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 ANXA4P09525 319 aaPredicted RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 NPSP0C0P6 89 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 NME2P22392 152 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 GLO1Q04760 184 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 AIMP2Q13155 320 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 SCGB2B2Q4G0G5 96 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 CLEC12AQ5QGZ9 265 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 HEPN1Q6WQI6 88 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PPP1R3BQ86XI6 285 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 NRROSQ86YC3 692 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 KIRREL1Q96J84 757 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 SMIM8Q96KF7 97 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 S100A13Q99584 98 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 NCOR1P1Q9H4R4 102 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 A0A1W2PPK0 400 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PMS2P2O95744 297 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 HKR1P10072 659 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 RHOQP17081 205 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 DPP4P27487 766 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 CD80P33681 288 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PPP2CBP62714 309 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PPP2CAP67775 309 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 HTRA3P83110 453 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 SLBPQ14493 270 aaKnown RBP eCLIP11.98□□□□□ -0.49
MSH2-201ENST00000233146 WSCD1Q658N2 575 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 OVCH1Q7RTY7 1134 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
MSH2-201ENST00000233146 RIOK2Q9BVS4 552 aaKnown RBP11.98□□□□□ -0.49
MSH2-201ENST00000233146 FKRPQ9H9S5 495 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms