RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 CMSS1Q9BQ75 279 aaKnown RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 C20orf85Q9H1P6 137 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 DNMT3BQ9UBC3 853 aaKnown RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 SGCEO43556 437 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 MMP2P08253 660 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 MSR1P21757 451 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 NME2P22392 152 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 EPHA4P54764 986 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 FOXK2Q01167 660 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 NXNL2Q5VZ03 156 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 TMEM174Q8WUU8 243 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 DNAJB11Q9UBS4 358 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 BET1O15155 118 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 GABARAPO95166 117 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 DRD1P21728 446 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 MTNR1BP49286 362 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 PFN3P60673 137 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 LTC4SQ16873 150 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 BPHLQ86WA6 291 aaPredicted RBP12.42□□□□□ -0.42
NEK4-201ENST00000233027 PFN4Q8NHR9 129 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 ARRDC3Q96B67 414 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 MBOAT4Q96T53 435 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 A4GALTQ9NPC4 353 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
NEK4-201ENST00000233027 SLC22A23A1A5C7 686 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 HMX2A2RU54 273 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ZNF264O43296 627 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SELENOFO60613 162 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 MT-CO2P00403 227 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PMP2P02689 132 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 TCRBP04435 133 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 HTR2CP28335 458 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 GCH1P30793 250 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 CAMK2DQ13557 499 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 CRMP1Q14194 572 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 NR0B2Q15466 257 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 NIPAL3Q6P499 406 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 RNF113BQ8IZP6 322 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 SVBPQ8N300 66 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 TM7SF3Q9NS93 570 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ANKRD12Q6UB98 2062 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PSMB1P20618 241 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 TRIM23P36406 574 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 AFF3P51826 1226 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 HTR4Q13639 388 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 RBM45Q8IUH3 476 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 L3MBTL4Q8NA19 623 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 OR10K1Q8NGX5 313 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SLC41A2Q96JW4 573 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 MCOLN1Q9GZU1 580 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SLC25A31Q9H0C2 315 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 FKRPQ9H9S5 495 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ZC3H12DA2A288 527 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 K7EPK0 472 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PLA2G7Q13093 441 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 RAB31Q13636 194 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 CDKN3Q16667 212 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ZNF836Q6ZNA1 936 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 OR13C9Q8NGT0 318 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ST7LQ8TDW4 575 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 ZMAT3Q9HA38 289 aaKnown RBP12.41□□□□□ -0.42
NEK4-201ENST00000233027 MED17Q9NVC6 651 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 OR14J1Q9UGF5 321 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK4-201ENST00000233027 TMEM212A6NML5 194 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 A8MXE2 369 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 H3BNC9 293 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 HTR1FP30939 366 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 PPT1P50897 306 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 RAB38P57729 211 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 TMEM64Q6YI46 380 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ENKD1Q9H0I2 346 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 LIN7BQ9HAP6 207 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 LTB4R2Q9NPC1 389 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 CUTCQ9NTM9 273 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SUSD2Q9UGT4 822 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ADAM29Q9UKF5 820 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 ACAD8Q9UKU7 415 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 A0A0D9SG52 128 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 H3BUI4 141 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SIX6O95475 246 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 GPLD1P80108 840 aa12.41□□□□□ -0.42
NEK4-201ENST00000233027 SF3B4Q15427 424 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEK4-201ENST00000233027 TMEM201Q5SNT2 666 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms