RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 EPXP11678 715 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 GLB1P16278 677 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 ACVR1BP36896 505 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 GDI2P50395 445 aaKnown RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 EMDP50402 254 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 OR10A3P58181 314 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 CRYZQ08257 329 aaKnown RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 DYRK1AQ13627 763 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 SLC36A2Q495M3 483 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 CD276Q5ZPR3 534 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 SLC22A10Q63ZE4 541 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 ZNF782Q6ZMW2 699 aaPredicted RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 SLC35F2Q8IXU6 374 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 FAM98AQ8NCA5 519 aaKnown RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 OR52E2Q8NGJ4 325 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 DEDD2Q8WXF8 326 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 VSTM2LQ96N03 204 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 NDEL1Q9GZM8 345 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 RANBP3Q9H6Z4 567 aaPredicted RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 R4GN57 208 aa22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 GOLGA4Q13439 2230 aaKnown RBP22.8■■□□□ 1.24
RUNDC3A-201ENST00000225441 ZNF879B4DU55 563 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 LRRN3E7EW58 273 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 LANCL1O43813 399 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 SYPP08247 313 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 BTCP35070 178 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 MPLP40238 635 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 NUBP1P53384 320 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 FAM27D1Q5T7N8 215 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 TOMM5Q8N4H5 51 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 ARHGEF39Q8N4T4 335 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 CYB561A3Q8NBI2 242 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 ADAMTS14Q8WXS8 1223 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 GHITMQ9H3K2 345 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 LRRN3Q9H3W5 708 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 GALNT9Q9HCQ5 603 aa22.79■■□□□ 1.24
RUNDC3A-201ENST00000225441 USP34Q70CQ2 3546 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PDCD5O14737 125 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 TFPIP10646 304 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 CLUP10909 449 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 STOMP27105 288 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 VSX2P58304 361 aaPredicted RBP22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 GALK2Q01415 458 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 ASB18Q6ZVZ8 466 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 ZNF595Q8IYB9 648 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 OR2I1PQ8NGU4 316 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 RPS4Y2Q8TD47 263 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 TTC9Q92623 222 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 YIPF5Q969M3 257 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PELI1Q96FA3 418 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PEX11GQ96HA9 241 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 GPX7Q96SL4 187 aaPredicted RBP22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 ARRDC1-AS1Q9H2J1 176 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 Q9N2J8 555 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 NRIP3Q9NQ35 241 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 KLHL1Q9NR64 748 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 AKAP7Q9P0M2 348 aaPredicted RBP22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 ZNF337Q9Y3M9 751 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 A0A087WUJ7 227 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 CTNSO60931 367 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 MYF5P13349 255 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 RNH1P13489 461 aaKnown RBP22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PRKCAP17252 672 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 COL9A2Q14055 689 aaPredicted RBP22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 SLC25A35Q3KQZ1 300 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 SNAP47Q5SQN1 464 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 RIT1Q92963 219 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PTCHD1Q96NR3 888 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 YIPF2Q9BWQ6 316 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 GMEB2Q9UKD1 530 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 PCDHGA5Q9Y5G8 931 aa22.78■■□□□ 1.24
RUNDC3A-201ENST00000225441 A0A0A6YYJ9 748 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 PRR33A8MZF0 331 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 PRAMEF2O60811 474 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 CPNE3O75131 537 aaKnown RBP22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 NGFRP08138 427 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 HIST1H1CP16403 213 aaKnown RBP22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 GPR3P46089 330 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 PPM1FP49593 454 aaPredicted RBP22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 PRPS1P60891 318 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 C19orf57Q0VDD7 668 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 CEP78Q5JTW2 689 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 FCRLBQ6BAA4 426 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 IL20RBQ6UXL0 311 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 UTS2BQ765I0 119 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 EID2Q8N6I1 236 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 SNX33Q8WV41 574 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 RBM18Q96H35 190 aaKnown RBP22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 GFM1Q96RP9 751 aaKnown RBP22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 DDOQ99489 341 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 NMNAT2Q9BZQ4 307 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 SMOC1Q9H4F8 434 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 ADAMTS9Q9P2N4 1935 aa22.77■■□□□ 1.24
RUNDC3A-201ENST00000225441 DNAH14Q0VDD8 3507 aa22.77■■□□□ 1.23
RUNDC3A-201ENST00000225441 A6NL46 340 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 SRPX2O60687 465 aaPredicted RBP22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 TFP02787 698 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 ST6GAL1P15907 406 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 GALNSP34059 522 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR1D5P58170 312 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms