RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 OR51A4Q8NGJ6 313 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 AHCYL2Q96HN2 611 aaKnown RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 OR2S2Q9NQN1 319 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF175Q9Y473 711 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 V9GY05 133 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 C13orf42A0A1B0GVH6 325 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 CACNB4O00305 520 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 NFATC1O95644 943 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 GABRA3P34903 492 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 NANOS3P60323 173 aaKnown RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 TMEM44Q2T9K0 475 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 TPGS2Q68CL5 300 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 FAM199XQ6PEV8 388 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 RHOUQ7L0Q8 258 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 C12orf40Q86WS4 652 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 ACTRT3Q9BYD9 372 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 WDR13Q9H1Z4 485 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 SLC6A15Q9H2J7 730 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-201ENST00000224807 ABRACLQ9P1F3 81 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 NPFFR2Q9Y5X5 522 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
SFXN3-201ENST00000224807 URB1O60287 2271 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 GXYLT2A0PJZ3 443 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 BET1O15155 118 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 FADS1O60427 444 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 HIST1H2ABP04908 130 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 UGT2B7P16662 529 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 RBM39Q14498 530 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 PON3Q15166 354 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 MFSD12Q6NUT3 480 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 HIST3H2AQ7L7L0 130 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 FOXRED2Q8IWF2 684 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 OR2AK2Q8NG84 335 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 OR10Z1Q8NGY1 313 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 OR2L2Q8NH16 312 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 CXorf40AQ8TE69 158 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 HIST1H2ACQ93077 130 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 BCL2L10Q9HD36 194 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 CMC2Q9NRP2 79 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 APOBEC3BQ9UH17 382 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 TRAV20A0A0B4J274 112 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 PRAMEF2O60811 474 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 CTNSO60931 367 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 LILRB5O75023 590 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 RPN2P04844 631 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF888P0CJ79 500 aaPredicted RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 VAMP1P23763 118 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 GPR85P60893 370 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF676Q8N7Q3 588 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 MS4A6EQ96DS6 147 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 C14orf105Q9NVL8 296 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF879B4DU55 563 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 GABARAPH6UMI1 98 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SC5DO75845 299 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OLFM2O95897 454 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SERPINA3P01011 423 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 FGL1Q08830 312 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 GAS6Q14393 721 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ZNF234Q14588 700 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 CDH26Q8IXH8 852 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SMIM19Q96E16 107 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 CNN2Q99439 309 aaKnown RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ARHGDIGQ99819 225 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PRSS27Q9BQR3 290 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PBX4Q9BYU1 374 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 SLC6A17Q9H1V8 727 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
SFXN3-201ENST00000224807 ST6GALNAC2Q9UJ37 374 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
SFXN3-201ENST00000224807 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms