RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 GPAT4Q86UL3 456 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 EMC3Q9P0I2 261 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 RHCGQ9UBD6 479 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 SEC14L4Q9UDX3 406 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 LRRC42Q9Y546 428 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 MED12LQ86YW9 2145 aa13.06□□□□□ -0.32
PCOLCE-201ENST00000223061 ZNF724A8MTY0 619 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 OR2T1O43869 369 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 PTDSS1P48651 473 aaKnown RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 RCN1Q15293 331 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 TMEM225Q6GV28 225 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 CYP2R1Q6VVX0 501 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 STK32CQ86UX6 486 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 NKAIN4Q8IVV8 208 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 PRRC1Q96M27 445 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 PRSS27Q9BQR3 290 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 A4GNTQ9UNA3 340 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 IGKV3D-15A0A087WSY6 115 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 M0R082 166 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 KRT36O76013 467 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 IGFBP2P18065 325 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 ATP6V1B2P21281 511 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 GRPRP30550 384 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 IFNA8P32881 189 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 VHLP40337 213 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 SLC16A1P53985 500 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 PDK3Q15120 406 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 GALNT5Q7Z7M9 940 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 KDM8Q8N371 416 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 ZNF417Q8TAU3 575 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 TMEM255BQ8WV15 326 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 RSRC1Q96IZ7 334 aaKnown RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 MOGAT1Q96PD6 335 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 ZNF587Q96SQ5 575 aaPredicted RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 ENKD1Q9H0I2 346 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 NOSIPQ9Y314 301 aaKnown RBP13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
PCOLCE-201ENST00000223061 hCG_2039718K7EN88 272 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 BGLAPP02818 100 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 FUT4P22083 530 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 EDNRAP25101 427 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 P2RY4P51582 365 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 IL1RL1Q01638 556 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 LTBQ06643 244 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 FAM27E3Q08E93 113 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 ST3GAL3Q11203 375 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 SLC17A1Q14916 467 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 TFAP2EQ6VUC0 442 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 KIF18BQ86Y91 864 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 PYURFQ96I23 114 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 FNDC11Q9BVV2 318 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 ACTR3BQ9P1U1 418 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 ENPP4Q9Y6X5 453 aa13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
PCOLCE-201ENST00000223061 SETXQ7Z333 2677 aaKnown RBP13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 GPR171O14626 319 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 FFAR1O14842 300 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 CH25HO95992 272 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 THRBP10828 461 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 POU2F1P14859 743 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 NTF4P34130 210 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 UGT2B15P54855 530 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 TSEN54Q7Z6J9 526 aaKnown RBP13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 DHFR2Q86XF0 187 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 PFN4Q8NHR9 129 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 ZNF426Q9BUY5 554 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 ASPNQ9BXN1 380 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 PRSS50Q9UI38 385 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 RASD1Q9Y272 281 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
PCOLCE-201ENST00000223061 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 DIRAS1O95057 198 aa13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 IGHV3-9P01782 118 aa13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 CD79BP40259 229 aa13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 OR3A2P47893 321 aa13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 VLDLRP98155 873 aa13.02□□□□□ -0.32
PCOLCE-201ENST00000223061 MS4A2Q01362 244 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms