RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 NUBP2Q9Y5Y2 271 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 RNF215Q9Y6U7 377 aa20.3■□□□□ 0.84
CCDC9-201ENST00000221922 NOTOA8MTQ0 251 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 CD1CP29017 333 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 SRP9P49458 86 aaKnown RBP20.29■□□□□ 0.84
CCDC9-201ENST00000221922 CSNK1EP49674 416 aaKnown RBP20.29■□□□□ 0.84
CCDC9-201ENST00000221922 KRT74Q7RTS7 529 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 SYS1Q8N2H4 156 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 METTL27Q8N6F8 245 aaPredicted RBP20.29■□□□□ 0.84
CCDC9-201ENST00000221922 FAM98AQ8NCA5 519 aaKnown RBP20.29■□□□□ 0.84
CCDC9-201ENST00000221922 OR52E2Q8NGJ4 325 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 OR4C3Q8NH37 302 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 CLDN23Q96B33 292 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 SLC19A3Q9BZV2 496 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 NUDT15Q9NV35 164 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 HEATR5AQ86XA9 2040 aa20.29■□□□□ 0.84
CCDC9-201ENST00000221922 FABP7O15540 132 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 BCKDHBP21953 392 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 LGALS3BPQ08380 585 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 CEP78Q5JTW2 689 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 NKAIN2Q5VXU1 208 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 DPY19L2P2Q6ZN68 376 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 RFLNBQ8N5W9 214 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 POMGNT2Q8NAT1 580 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 ZNF527Q8NB42 609 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 OR13C5Q8NGS8 318 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 SMIM19Q96E16 107 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 EMC7Q9NPA0 242 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 SPAG17Q6Q759 2223 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 OR2W5A6NFC9 320 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 TNFRSF10AO00220 468 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 CD1AP06126 327 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 EPXP11678 715 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 ATF1P18846 271 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 PITPNAQ00169 270 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 GGTLC2Q14390 218 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 ANGPT1Q15389 498 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 KLHL26Q53HC5 615 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 LRRC17Q8N6Y2 441 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 THAP4Q8WY91 577 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 ZNF337Q9Y3M9 751 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 MMACHCQ9Y4U1 282 aa20.28■□□□□ 0.84
CCDC9-201ENST00000221922 EML5Q05BV3 1969 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 A0A1W2PRG6 482 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 C17orf105B2RV13 164 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 H3BMH7 237 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 GNB5O14775 395 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 TFP02787 698 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 CLPSP04118 112 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 TCRBP04435 133 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 OR2T7P0C7T2 308 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 ADH7P40394 386 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 ACTA2P62736 377 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 ACTG2P63267 376 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 CAMK2BQ13554 666 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 CDK5R1Q15078 307 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 NDUFAF6Q330K2 333 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 LYPD4Q6UWN0 246 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 LYPD8Q6UX82 237 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 MED25Q71SY5 747 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 SLITRK4Q8IW52 837 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 TOMM5Q8N4H5 51 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 OR2T27Q8NH04 317 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 PELI1Q96FA3 418 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 IRF2BPLQ9H1B7 796 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 COPZ2Q9P299 210 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 GMEB2Q9UKD1 530 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 IER3IP1Q9Y5U9 82 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 PCDH15Q96QU1 1955 aa20.27■□□□□ 0.84
CCDC9-201ENST00000221922 ABCA7Q8IZY2 2146 aa20.27■□□□□ 0.83
CCDC9-201ENST00000221922 TRAV6A0A075B6T7 132 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 A0A1W2PPC1 479 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 ARL6IP5O75915 188 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 UCHL1P09936 223 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 HIST1H1CP16403 213 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 STOMP27105 288 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 AFF3P51826 1226 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 ISXQ2M1V0 245 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 TP53I3Q53FA7 332 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 ZNF782Q6ZMW2 699 aaPredicted RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 FAM71CQ8NEG0 241 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 SDR9C7Q8NEX9 313 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 OR11H7Q8NGC8 314 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 OR4K13Q8NH42 304 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 C17orf50Q8WW18 174 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 TTC9Q92623 222 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 C3orf49Q96BT1 292 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 OR2M2Q96R28 347 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 CNN2Q99439 309 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 UBQLN4Q9NRR5 601 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 ING4Q9UNL4 249 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 IGHV1OR21-1A0A087WYE8 117 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 TMEM150CB9EJG8 249 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 NUDT21O43809 227 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 OR7A10O76100 309 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 IGF2P01344 180 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 RPL4P36578 427 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 GDI2P50395 445 aaKnown RBP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 HCCSP53701 268 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms