RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 SAMD8Q96LT4 415 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 ARHGAP9Q9BRR9 750 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 RERGLQ9H628 205 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 INIPQ9NRY2 104 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 MED31Q9Y3C7 131 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 CDH10Q9Y6N8 788 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 V9GYH0 126 aa13.77□□□□□ -0.21
PAF1-201ENST00000221265 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 LRRN3E7EW58 273 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 RNF113BQ8IZP6 322 aaKnown RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 NKD1Q969G9 470 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 BPIFA2Q96DR5 249 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 WDFY2Q96P53 400 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ZNF649Q9BS31 505 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ENKD1Q9H0I2 346 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 CDCP1Q9H5V8 836 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 MED17Q9NVC6 651 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 PLEKHB1Q9UF11 243 aaPredicted RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 EXOGQ9Y2C4 368 aaKnown RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 FREM3P0C091 2139 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 A0A087WUJ7 227 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 C21orf140B9A014 251 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 NUDT14O95848 222 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 LALBAP00709 142 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 CEACAM1P13688 526 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 NAGAP17050 411 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 SLC1A3P43003 542 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 RUNX1T1Q06455 604 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ZMAT1Q5H9K5 638 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 OR2T33Q8NG76 320 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 RNF138Q8WVD3 245 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 DNAJA4Q8WW22 397 aaPredicted RBP13.76□□□□□ -0.21
PAF1-201ENST00000221265 UFD1Q92890 307 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 RFKQ969G6 155 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 TMCO6Q96DC7 493 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 TM9SF2Q99805 663 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 GPR87Q9BY21 358 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 CMAHPQ9Y471 501 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
PAF1-201ENST00000221265 SSX4O60224 188 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 EIF4E2O60573 245 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 HTR1FP30939 366 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 SDC2P34741 201 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 PTGDSP41222 190 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 DEFA1P59665 94 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 DEFA3P59666 94 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 CRYZQ08257 329 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 HNRNPA0Q13151 305 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 SELENBP1Q13228 472 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 INPP5JQ15735 1006 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 NTRK2Q16620 822 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 COL28A1Q2UY09 1125 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 ZNF791Q3KP31 576 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 CRTC2Q53ET0 693 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 B3GNTL1Q67FW5 361 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 CCBE1Q6UXH8 406 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 IL20RBQ6UXL0 311 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 NUP54Q7Z3B4 507 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 SYT14Q8NB59 555 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 OR5W2Q8NH69 310 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 HS6ST2Q96MM7 605 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 KCTD7Q96MP8 289 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 TEX12Q9BXU0 123 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 MIXL1Q9H2W2 232 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 UBQLN3Q9H347 655 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 HINT3Q9NQE9 182 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 DLL3Q9NYJ7 618 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 TBC1D24Q9ULP9 559 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 FRYQ5TBA9 3013 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 TRAV27A0A087WT01 109 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 CDRT15L2A8MXV6 281 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 SLC30A4O14863 429 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 SNPHO15079 494 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 CDC40O60508 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
PAF1-201ENST00000221265 HMGN1P05114 100 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 TACR3P29371 465 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 RBM34P42696 430 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 TMED10P49755 219 aaKnown RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 CTBP2P56545 445 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 FABP5Q01469 135 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 ZNF79Q15937 498 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 CARTPTQ16568 116 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
PAF1-201ENST00000221265 ZNF468Q5VIY5 522 aaPredicted RBP13.75□□□□□ -0.21
PAF1-201ENST00000221265 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms