RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ATG4BQ9Y4P1 393 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TOR1AO14656 332 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 ALDOCP09972 364 aaKnown RBP17.55■□□□□ 0.4
SMPD3-201ENST00000219334 NPPBP16860 134 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 BDKRB2P30411 391 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 SIRT6Q8N6T7 355 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 SGK3Q96BR1 496 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 TBC1D29Q9UFV1 150 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 ENPP5Q9UJA9 477 aa17.55■□□□□ 0.4
SMPD3-201ENST00000219334 IGHV3-20A0A0C4DH32 117 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TFPTP0C1Z6 253 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 ACBD4Q8NC06 268 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 OR13C9Q8NGT0 318 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 H1FXQ92522 213 aaKnown RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 EHFQ9NZC4 300 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 FANCGO15287 622 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 PRAF2O60831 178 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 CA5AP35218 305 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 SNCAP37840 140 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TBC1D28Q2M2D7 210 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 FBXO27Q8NI29 283 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 BOD1Q96IK1 185 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 EDEM2Q9BV94 578 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TMEM72A0PK05 275 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 GAPDHSO14556 408 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 HLA-DMAP28067 261 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 PRKAR1BP31321 381 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 ANKRD13BQ86YJ7 626 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 NDNFQ8TB73 568 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 EGLN1Q9GZT9 426 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 CXorf36Q9H7Y0 433 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 RASD1Q9Y272 281 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 NUBP2Q9Y5Y2 271 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TRBV4-1A0A0J9YWV2 114 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TMEM212A6NML5 194 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 PRRT4C9JH25 899 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF14P17017 642 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 LIM2P55344 173 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 LTBQ06643 244 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 OR56B1Q8NGI3 324 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 HYLS1Q96M11 299 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 MENTQ9BUN1 341 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 ARRDC1-AS1Q9H2J1 176 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 SIDT1Q9NXL6 827 aaKnown RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 YARS2Q9Y2Z4 477 aaKnown RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 PRAMEF4O60810 478 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 STK17BO94768 372 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 NXPH2O95156 264 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 TAS2R46P59540 309 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 IL13RA1P78552 427 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 SLC14A1Q13336 389 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 HYAL4Q2M3T9 481 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 FBXW12Q6X9E4 464 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 OR2T35Q8NGX2 323 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 OR51E2Q9H255 320 aa17.54■□□□□ 0.4
SMPD3-201ENST00000219334 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-201ENST00000219334 SYT5O00445 386 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 TPPPO94811 219 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 SORBS2O94875 1100 aaKnown RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 GABRB3P28472 473 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 TIMD4Q96H15 378 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 THAP7Q9BT49 309 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 KLF13Q9Y2Y9 288 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 MYH6P13533 1939 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 EDN3P14138 238 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 FKBP2P26885 142 aaKnown RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 RUNX2Q13950 521 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 MFSD12Q6NUT3 480 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 METAP1DQ6UB28 335 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 ELF4Q99607 663 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 OCSTAMPQ9BR26 566 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 POM121BA6NF01 834 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 FOXD2O60548 495 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 GSTP1P09211 210 aaKnown RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 IL3RAP26951 378 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 TAS2R19P59542 299 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 GABREP78334 506 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 ESPNLQ6ZVH7 1005 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 CD163Q86VB7 1156 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 DMBX1Q8NFW5 382 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 OR14K1Q8NGZ2 314 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 NEURL3Q96EH8 262 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 SSX3Q99909 188 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 NRSN2Q9GZP1 204 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 A0A1W2PPV4 95 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 EIF4E2O60573 245 aaKnown RBP17.53■□□□□ 0.4
SMPD3-201ENST00000219334 DPM1O60762 260 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 ALDH3B2P48448 385 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 FAM198BQ6UWH4 519 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 HSD17B8Q92506 261 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 ELP4Q96EB1 424 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 LOXL2Q9Y4K0 774 aa17.53■□□□□ 0.4
SMPD3-201ENST00000219334 CDHR4A6H8M9 788 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 MKRN2OSH3BPM6 223 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 ARPC1BO15143 372 aaKnown RBP17.52■□□□□ 0.4
SMPD3-201ENST00000219334 WDR76Q9H967 626 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 PRAMEF27A3QJZ7 478 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 BET1O15155 118 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms