RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZNF684Q5T5D7 378 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 MTFR2Q6P444 385 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 PARM1Q6UWI2 310 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 KCTD20Q7Z5Y7 419 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 OR6K6Q8NGW6 343 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 OR2T35Q8NGX2 323 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 C15orf40Q8WUR7 153 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 FCAMRQ8WWV6 532 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 RAB40AQ8WXH6 277 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 RIT1Q92963 219 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 LCORQ96JN0 433 aaPredicted RBP12.18□□□□□ -0.46
SRP54-201ENST00000216774 MTIF3Q9H2K0 278 aaKnown RBP12.18□□□□□ -0.46
SRP54-201ENST00000216774 CCDC86Q9H6F5 360 aaKnown RBP12.18□□□□□ -0.46
SRP54-201ENST00000216774 Q9N2J8 555 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 HRASLS2Q9NWW9 162 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 V9GY05 133 aa12.18□□□□□ -0.46
SRP54-201ENST00000216774 TEX51A0A1B0GUA7 166 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 GMDSO60547 372 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 ZFPL1O95159 310 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 LCN1P31025 176 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 MNDAP41218 407 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 YPEL5P62699 121 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 HES5Q5TA89 166 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 OR6V1Q8N148 313 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 RCBTB1Q8NDN9 531 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 OR52I2Q8NH67 350 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 FGF14Q92915 247 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 S100A16Q96FQ6 103 aaKnown RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 CCNL2Q96S94 520 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 LIN7BQ9HAP6 207 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 FBXL3Q9UKT7 428 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 ACOD1A6NK06 481 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 SNAPC5O75971 98 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 TPPPO94811 219 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 LDOC1O95751 146 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 CSTAP01040 98 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 IGF2P01344 180 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 IFNA16P05015 189 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 TACSTD2P09758 323 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 MAPK3P27361 379 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 PTH2RP49190 550 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 HTRA3P83110 453 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 OLFML2AQ68BL7 652 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 SFRP4Q6FHJ7 346 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 NPSR1Q6W5P4 371 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 FCRLAQ7L513 359 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 HDDC2Q7Z4H3 204 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 ZNF440Q8IYI8 595 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 ZNF433Q8N7K0 673 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 OR6C4Q8NGE1 309 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 NSMAFQ92636 917 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 SLC25A18Q9H1K4 315 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 METTL17Q9H7H0 456 aaPredicted RBP12.17□□□□□ -0.46
SRP54-201ENST00000216774 RXFP3Q9NSD7 469 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 STARD5Q9NSY2 213 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 NKIRAS2Q9NYR9 191 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
SRP54-201ENST00000216774 SCN2AQ99250 2005 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 ANKRD20A5PA0PJZ0 165 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SERINC4A6NH21 518 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 ZSCAN5BA6NJL1 495 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 G3V3Q6 166 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 FOXS1O43638 330 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 PRAMEF2O60811 474 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 MPC2O95563 127 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 KLF8O95600 359 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 PDGFAP04085 211 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 CPN1P15169 458 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SELENOPP49908 381 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SLC25A1P53007 311 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 NANOS3P60323 173 aaKnown RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 ERVK-25P63136 954 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 PUDPQ08623 228 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 STX4Q12846 297 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 GRK1Q15835 563 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 LINC01590Q5TEZ4 76 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 OR9A4Q8NGU2 314 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 ZPLD1Q8TCW7 415 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 RNF166Q96A37 237 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 RASD2Q96D21 266 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 UTP23Q9BRU9 249 aaKnown RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SLITRK2Q9H156 845 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 NPDC1Q9NQX5 325 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 MOKQ9UQ07 419 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms