RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ZNF865P0CJ78 1059 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 C6P13671 934 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SPOCK1Q08629 439 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CST6Q15828 149 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR2T2Q6IF00 324 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ZNF322Q6U7Q0 402 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 SKA3Q8IX90 412 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR4C5Q8NGB2 326 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 NPRL2Q8WTW4 380 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SGCZQ96LD1 299 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 PITX2Q99697 317 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 DPH7Q9BTV6 452 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SRRQ9GZT4 340 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CD300LBA8K4G0 201 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CYB5BO43169 146 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 HBQ1P09105 142 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ZNF74Q16587 644 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR6S1Q8NH40 331 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 GPR174Q9BXC1 333 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MED20Q9H944 212 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 SPATA6Q9NWH7 488 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 C1orf123Q9NWV4 160 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 A0A1W2PPV4 95 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 LEUTXA8MZ59 168 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 LAMTOR5O43504 91 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 GPRIN2O60269 458 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 NME2P1O60361 137 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 FOLR1P15328 257 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ACHEP22303 614 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 AKR1C3P42330 323 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 DGCR2P98153 550 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 BAMBIQ13145 260 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CCINQ13939 588 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 TMEM81Q6P7N7 255 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 MRPL10Q7Z7H8 261 aaKnown RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 CNTN4Q8IWV2 1026 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 TMEM130Q8N3G9 435 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 UBAC2Q8NBM4 344 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR8D4Q8NGM9 314 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 OR51Q1Q8NH59 317 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 CDCA3Q99618 268 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 SLC12A9Q9BXP2 914 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 PELI2Q9HAT8 420 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 C2orf42Q9NWW7 574 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 ZNF142P52746 1687 aaPredicted RBP9.73□□□□□ -0.85
VCL-201ENST00000211998 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
VCL-201ENST00000211998 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 ANKUB1A6NFN9 424 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SYT5O00445 386 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SOCS6O14544 535 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 TCAPO15273 167 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 B4GALT3O60512 393 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 PAX6P26367 422 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 BMPR1AP36894 532 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SLC39A5Q6ZMH5 540 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ACOT7LQ6ZUV0 252 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 PLXDC1Q8IUK5 500 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.72□□□□□ -0.854e-6■■■□□ 15.2
VCL-201ENST00000211998 ACOXLQ9NUZ1 547 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ANKRD12Q6UB98 2062 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 TRAV27A0A087WT01 109 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 RGS13O14921 159 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SLC19A1P41440 591 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 RABIFP47224 123 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SPINT3P49223 89 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 PRPS1P60891 318 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 RAB1AP62820 205 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 FABP9Q0Z7S8 132 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 DEFB134Q4QY38 66 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 TMEM71Q6P5X7 295 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 OR51S1Q8NGJ8 323 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 BPIFA2Q96DR5 249 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 PGAP3Q96FM1 320 aaPredicted RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 EXOSC3Q9NQT5 275 aaKnown RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 TREX1Q9NSU2 369 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 SLC6A14Q9UN76 642 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 FLVCR2Q9UPI3 526 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
VCL-201ENST00000211998 IGLON5A6NGN9 336 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 M0QZQ0 153 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 CBX7O95931 251 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 CR2P20023 1033 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 RTP2Q5QGT7 225 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 GTF2H5Q6ZYL4 71 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 CDS1Q92903 461 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 ISYNA1Q9NPH2 558 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 MUTYHQ9UIF7 546 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 MROH6A6NGR9 719 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 FAM227AF5H4B4 570 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 GPR171O14626 319 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 GPR137BO60478 399 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 CTSAP10619 480 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 OR4N5Q8IXE1 308 aa9.72□□□□□ -0.85
VCL-201ENST00000211998 LFNGQ8NES3 379 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms