RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 GMFBP60983 142 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 FABP5Q01469 135 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ELOAQ14241 798 aaKnown RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 MELKQ14680 651 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SGCBQ16585 318 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 XKRXQ6PP77 449 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 CCDC80Q76M96 950 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 DNAAF1Q8NEP3 725 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 APH1BQ8WW43 257 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SLC6A7Q99884 636 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 OR10A5Q9H207 317 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SLC35A3Q9Y2D2 325 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 FFAR1O14842 300 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SRPX2O60687 465 aaPredicted RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 PSMA3P25788 255 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 BAK1Q16611 211 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 FAM205BPQ63HN1 556 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ULK3Q6PHR2 472 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF227Q86WZ6 799 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 POGLUT1Q8NBL1 392 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SLIRPQ9GZT3 109 aaKnown RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 MGAT4CQ9UBM8 478 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 A4GNTQ9UNA3 340 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 TRBV11-1A0A0K0K1C0 115 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 PPM1BO75688 479 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 LDOC1O95751 146 aaPredicted RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 CCL4P13236 92 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 S1PR1P21453 382 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 TACR3P29371 465 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ZNF41P51814 821 aaPredicted RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ACTC1P68032 377 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 ACTA1P68133 377 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 OXA1LQ15070 435 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 OR7A5Q15622 319 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 PLK5Q496M5 336 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SLITRK4Q8IW52 837 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
CHPF2-201ENST00000035307 STT3BQ8TCJ2 826 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 SFXN5Q8TD22 340 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 RBP7Q96R05 134 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 FOLH1BQ9HBA9 442 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 C20orf141Q9NUB4 165 aa11.09□□□□□ -0.63
CHPF2-201ENST00000035307 THADAQ6YHU6 1953 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 IGHV1OR21-1A0A087WYE8 117 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 A0A1B0GW55 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 H2BFMP0C1H6 154 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L2P0CJ85 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L3P0CJ86 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L4P0CJ87 422 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L5P0CJ88 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L6P0CJ89 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4L7P0CJ90 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 CD79BP40259 229 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 RFC3P40938 356 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 PITPNBP48739 271 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 NKAIN1Q4KMZ8 207 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 PAPD4Q6PIY7 484 aaKnown RBP11.08□□□□□ -0.64
CHPF2-201ENST00000035307 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 SLC25A45Q8N413 288 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF283Q8N7M2 679 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 NANOGP1Q8N7R0 232 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 GDPD1Q8N9F7 314 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OR5AK2Q8NH90 309 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 FCAMRQ8WWV6 532 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 FKBP14Q9NWM8 211 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DUX4Q9UBX2 424 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 EPHA6Q9UF33 1036 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 ZNF639Q9UID6 485 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OSGIN1Q9UJX0 560 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DIMT1Q9UNQ2 313 aaKnown RBP11.08□□□□□ -0.64
CHPF2-201ENST00000035307 RCE1Q9Y256 329 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 HTR3EA5X5Y0 456 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 L7N2F9 121 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 POU3F3P20264 500 aaPredicted RBP11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OR3A3P47888 321 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OR3A2P47893 321 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 CCR6P51684 374 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 RAB38P57729 211 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 GPR85P60893 370 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 VASNQ6EMK4 673 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 GDPGP1Q6ZNW5 385 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 MS4A15Q8N5U1 240 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 SIRT6Q8N6T7 355 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 OR1L3Q8NH93 324 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 NR4A3Q92570 626 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 PPP4R1LQ9P1A2 415 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 DNAH14Q0VDD8 3507 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 A0A0A6YYD5 115 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 NOTOA8MTQ0 251 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 IDSB3KWA1 339 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 ARPC1BO15143 372 aaKnown RBP11.08□□□□□ -0.64
CHPF2-201ENST00000035307 RBBP9O75884 186 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 HBQ1P09105 142 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 PTPN6P29350 595 aa11.08□□□□□ -0.64
CHPF2-201ENST00000035307 ACY1Q03154 408 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms