RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Glt28d2Q8BML3 165 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Dppa4Q8CCG4 296 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Ntng1Q8R4G0 539 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Cd276Q8VE98 316 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Pdzk1Q9JIL4 519 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nrip3Q9JJR9 240 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Dennd4cA6H8H2 1906 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr31E9Q3K2 317 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Zfp949E9Q732 603 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Prdx4O08807 274 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gpr50O88495 591 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nfatc3P97305 1075 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Serpinf2Q61247 491 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Kng2Q6S9I3 644 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Slc36a2Q8BHK3 478 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Zc3h14Q8BJ05 735 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Lpar4Q8BLG2 370 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Slc15a3Q8BPX9 578 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Catsper4Q8BVN3 442 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Guf1Q8C3X4 651 aaKnown RBP20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Vmn1r210Q8R274 306 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Tmem185bQ8R3R5 350 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Upk3bl1Q9D701 249 aa20.72■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr608E9Q564 316 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gm10479K7N6H4 105 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Emp3O35912 163 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Pdlim3O70209 316 aaKnown RBP20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Klk1b11P15946 261 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr6P34986 316 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Nkx3-2P97503 333 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Gm732Q3V0P9 516 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Lamp3Q7TST5 411 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Hs6st2Q80UW0 612 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Enpp6Q8BGN3 440 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Luzp2Q8BGY3 345 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Coro2aQ8C0P5 524 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Abhd14bQ8VCR7 210 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr98Q8VFD9 309 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Olfr820Q8VFU5 312 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Snx4Q91YJ2 450 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Fam69aQ9D6I7 428 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Wnt16Q9QYS1 364 aa20.71■□□□□ 0.91
Scn1b-201ENSMUST00000098548 Lcn11A2BHR2 178 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Pdia2D3Z6P0 527 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ms4a7E9Q9V5 267 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr889L7N1Y6 314 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 TP20293 436 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ccr4P51680 360 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 DbtP53395 482 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Klra2Q60660 288 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Nr0b1Q61066 472 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc29a2Q61672 456 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Hapln3Q80WM5 359 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 RybpQ8CCI5 228 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 H2afy2Q8CCK0 372 aaKnown RBP20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Grk5Q8VEB1 590 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr531Q8VGL2 304 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr649Q8VGW1 312 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Npas3Q9QZQ0 925 aa20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Eif2s3xQ9Z0N1 472 aaKnown RBP20.7■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Trbc2A0A075B5J4 173 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm14418A2ARR6 358 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm14322A2AW66 358 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Btbd16E9Q173 522 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm8237E9Q257 205 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm5407E9Q7Q1 248 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm21876F6XK35 94 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 P01822 137 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 P01851 173 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Polr1cP52432 346 aaKnown RBP20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 IspdQ5RJG7 447 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 NnatQ61979 81 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 BC080695Q66JY9 481 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Naa50Q6PGB6 169 aaKnown RBP20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Rnf122Q8BP31 155 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Unc119bQ8C4B4 251 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Faim2Q8K097 317 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Rhno1Q8K3A4 235 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Paip1Q8VE62 400 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr683Q8VGV1 319 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Rab40bQ8VHP8 278 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc22a7Q91WU2 540 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gpx4Q91XR9 253 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Mrgpra8Q91ZC4 305 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Nmd3Q99L48 503 aaKnown RBP20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ifitm3Q9CQW9 137 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ptges3lQ9D9A7 131 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm17190V9GX38 357 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Vmn1r10W4VSP8 311 aa20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Arid1aA2BH40 2283 aaKnown RBP20.69■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Itpr1P11881 2749 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm44973A0A140LJJ1 189 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 PvrigA0A1B0GS01 234 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Rpl7P14148 270 aaKnown RBP20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 S100gP97816 79 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Rspo3Q2TJ95 277 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ipcef1Q5DU31 406 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc35g3Q5F297 340 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc6a5Q761V0 799 aa20.68■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Zc3h12dQ8BIY3 533 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms