RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Csnk1a1Q8BK63 337 aaKnown RBP11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Derl2Q8BNI4 239 aaKnown RBP11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Il23rQ8K4B4 644 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr713Q920G5 324 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc23a2Q9EPR4 648 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Tbl1xQ9QXE7 527 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 ClcnkbQ9WUB6 687 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1160A2AVT0 319 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn2r75G5E8Z7 853 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pip5k1cO70161 661 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Epha4Q03137 986 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lpar4Q8BLG2 370 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ctxn1Q8K129 82 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fam199xQ8K2D0 388 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 FrkQ922K9 512 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cdc42ep3Q9CQC5 254 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 PsenenQ9CQR7 101 aa11.22□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm42420A0A0J9YUQ2 99 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gabrr3B2RXA8 464 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prdx1P35700 199 aaKnown RBP11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Znf367Q0VDT2 340 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Pcbp2Q61990 362 aaKnown RBP11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1061Q7TR72 313 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Got1l1Q7TSV6 404 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nyap2Q8BM65 682 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fam149aQ8CFV2 787 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1284Q8VF29 311 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr777Q8VFH3 311 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr732Q8VFT5 308 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Btf3l4Q9CQH7 158 aaKnown RBP11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nup188Q6ZQH8 1759 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 H2-T10F6T1I5 379 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Esp8F7AMQ8 149 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gjb3P28231 270 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lpar5Q149R9 372 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Prss54Q7M756 383 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1298Q8VGE6 312 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Lactb2Q99KR3 288 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 IL36RNQ9QYY1 156 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 PtprhE9Q0N2 971 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Ifna5P07349 189 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Fut4Q11127 433 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Rpp38Q80UU2 280 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 RabepkQ8VCH5 380 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr736Q8VFT6 312 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr676Q8VGZ9 317 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r52Q9EP79 309 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Mrpl39Q9JKF7 336 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gab1Q9QYY0 695 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Bcat2O35855 393 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Chrm4P32211 479 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc1a3P56564 543 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dmrtc1bQ2PMX6 267 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cdt1Q8R4E9 557 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Otud7aQ8R554 926 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr1254Q8VFB1 314 aa11.21□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cd300ld4A2A7W1 245 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn2r76E9Q3F5 853 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Eef1a1P10126 462 aaKnown RBP11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cdc25bP30306 576 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Hexim2Q3TVI4 313 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 C130050O18RikQ497Y9 356 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cd53Q61451 219 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Pcdhga7Q6DD96 935 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cd300ld3Q6SJQ5 245 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bcl7aQ9CXE2 210 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Amdhd1Q9DBA8 426 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ms4a4aA0A087WRT7 236 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ndor1A2AI05 598 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr889L7N1Y6 314 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Grm5Q3UVX5 1203 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmub2Q3V209 319 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tmem202Q80W35 275 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 FkrpQ8CG64 494 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 CenpmQ9CQA0 180 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cpn2Q9DBB9 547 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dclre1aQ9JIC3 1026 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kdf1A2A9F4 397 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr115B2RTB9 312 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Usp2O88623 613 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Osbp2Q5QNQ6 908 aa11.21□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bmi1P25916 324 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dlk1Q09163 385 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 B430306N03RikQ6QX36 289 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1087Q7TR63 313 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 AardQ811W1 167 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gpr20Q8BYC4 358 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 PollQ9QXE2 573 aaKnown RBP11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ms4a7E9Q9V5 267 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 PomcP01193 235 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 P06321 130 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 S100a10P08207 97 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ifna9P09235 190 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 GcP21614 476 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Paqr6Q6TCG5 343 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tdpoz5Q6YCH1 340 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kcnmb1Q8CAE3 191 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lgi4Q8K1S1 537 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Hyal1Q91ZJ9 462 aa11.2□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ndrg3Q9QYF9 375 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms