RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Pck2Q8BH04 640 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem200aQ8C817 491 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zbtb20Q8K0L9 741 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Erlec1Q8VEH8 483 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1250Q8VGM3 314 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr1052Q8VGR8 312 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Spryd4Q91WK1 207 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc52a3Q9D6X5 460 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccdc54Q9DAL3 329 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Oaz3Q9R109 243 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm9493F6SVV1 192 aaKnown RBP11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm8024L7N2E0 100 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Stt3aP46978 705 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Fam189a1Q6A044 515 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn2r81Q80Z09 865 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Q8BR90 294 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Q8C3I9 435 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zc3h10Q8R205 435 aaKnown RBP11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r215Q8R264 300 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ntng1Q8R4G0 539 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cacna1fQ9JIS7 1985 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Fam136b-psA0A140T8T1 138 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 A0A1W2P799 418 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 RradO88667 308 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 P01878 344 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Camk2aP11798 478 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc2a1P17809 492 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dpp10Q6NXK7 797 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Spag1Q80ZX8 901 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rnf26Q8BUH7 424 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nsa2Q9CR47 260 aaKnown RBP11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rab3bQ9CZT8 219 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nkain1Q9D035 207 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 OxsmQ9D404 459 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr44Q9EQB8 314 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cd83O88324 196 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Capns1O88456 269 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hsd3b3P26150 373 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nhlh1Q02576 133 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm10644Q3TZG3 87 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr128Q7TRJ1 308 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 RinlQ80UW3 563 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zfp790Q80ZX2 779 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r23Q8R2D0 302 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Calhm2Q8VEC4 323 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Adam23Q9R1V7 829 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CtszQ9WUU7 306 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ighv15-2A0A0A6YX72 118 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm2022A0A1Y7VLT7 144 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tomm5B1AXP6 51 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm10260F6YVP7 152 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm2075J3QMW5 144 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 RbpjlO08674 515 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rab11bP46638 218 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 BB287469Q3UT53 144 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem255bQ5FW56 369 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hapln3Q80WM5 359 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prox2Q8BII1 593 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cadm4Q8R464 388 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 NagsQ8R4H7 527 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lingo1Q9D1T0 614 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ca13Q9D6N1 262 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hacl1Q9QXE0 581 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm14399A2ARW8 610 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm8225D3Z536 292 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 CdaP56389 146 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nfatc3P97305 1075 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ext1P97464 746 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cpt1cQ8BGD5 798 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ikzf4Q8C208 586 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mtnr1bQ8CIQ6 364 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ackr4Q924I3 350 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccdc167Q9D162 97 aa11.01□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Elavl1P70372 326 aaKnown RBP11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm45902Q3UDN3 361 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Chst8Q8BQ86 417 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cnot2Q8C5L3 540 aaKnown RBP11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 BphlQ8R164 291 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 NifkQ91VE6 317 aaKnown RBP11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ptov1Q91VU8 416 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Abcg5Q99PE8 652 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Psmd8Q9CX56 353 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pde7bQ9QXQ1 446 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ca5bQ9QZA0 317 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pdcd1lg2Q9WUL5 247 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kiaa0100Q5SYL3 2234 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm45711E0CXA2 391 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 GcgP55095 180 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Emx1Q04742 257 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Bod1Q5SQY2 173 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 DmknQ6P253 517 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Adam4Q8CGQ2 763 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r74Q8R290 304 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr938Q9EQ93 315 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm26992S4R1A3 76 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm14418A2ARR6 358 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm14322A2AW66 358 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr115B2RTB9 312 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 MyogP12979 224 aa11□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tead3P70210 439 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms