RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 AspnQ99MQ4 373 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zmynd19Q9CQG3 227 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Pfn4Q9D6I3 129 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ankrd60A2AMD2 318 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmed7D3YZZ5 224 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Serpina3jD3Z451 420 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn2r110E9PWD5 858 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm20683H3BKJ1 410 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc30a4O35149 430 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 FkbplO35450 347 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Pou3f1P21952 449 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 AcadlP51174 430 aaKnown RBP12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 ArsgQ3TYD4 525 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Q3USZ8 430 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Serinc4Q5XK03 492 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Elavl3Q60900 367 aaKnown RBP12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc6a17Q8BJI1 727 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gper1Q8BMP4 375 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Mab21l2Q8BPP1 359 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 AgmoQ8BS35 447 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Alkbh3Q8K1E6 286 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Rab14Q91V41 215 aaKnown RBP12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Derl3Q9D8K3 228 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Bpnt1Q9Z0S1 308 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Frem3Q5H8B9 2123 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 6430628N08RikA0A0U1RQ45 177 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lrrc72A0A1Y7VMI0 288 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 4930467E23RikD3Z1P8 350 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm45062E0CZ38 131 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm15319E9Q637 350 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nipsnap1O55125 284 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Bcl2a1dO55179 172 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Dpm1O70152 260 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Papss2O88428 621 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cd28P31041 218 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Rps11P62281 158 aaKnown RBP12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Rit1P70426 219 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Snai2P97469 269 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fam98aQ3TJZ6 515 aaKnown RBP12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gal3st4Q3V1B8 480 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 MertkQ60805 994 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lrrn1Q61809 716 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 CltbQ6IRU5 229 aaKnown RBP12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Flrt2Q8BLU0 660 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm21119Q8C646 350 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Peli1Q8C669 418 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Plekho2Q8K124 495 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 MepceQ8K3A9 666 aaKnown RBP12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Asb18Q8VHA6 467 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Park7Q99LX0 189 aaKnown RBP12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Chmp1b2Q9CQD4 199 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 HhatlQ9D1G3 503 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 SmpxQ9DC77 85 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Isyna1Q9JHU9 557 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Dnajb8Q9QYI7 227 aa12.41□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp345A2AQA1 561 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc25a25A2ASZ8 469 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slco5a1E9PVD9 850 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm21797J3QNW5 180 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm8374L7N2A9 172 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 EmdO08579 259 aaKnown RBP12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Kcnj15O88932 375 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Camk2aP11798 478 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Mmp2P33434 662 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Plpp4Q0VBU9 271 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fam71f1Q3UZD7 341 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc30a1Q60738 503 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Epha1Q60750 977 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr309Q7TS01 308 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gadl1Q80WP8 550 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ston1Q8CDJ8 730 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 HinfpQ8K1K9 503 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fbxo45Q8K3B1 286 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr97Q8VFE1 310 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Exosc4Q921I9 245 aaKnown RBP12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc6a19Q9D687 634 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem41aQ9D8U2 264 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Akr1a1Q9JII6 325 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Sfrp5Q9WU66 314 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 AI182371A2AS37 356 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1206A2ATJ9 307 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ptrhd1D3Z4S3 140 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr610E9Q598 315 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 P04214 136 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lhx1P63006 406 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tcf7Q00417 419 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zrsr1Q64707 428 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1080Q7TR67 313 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr699Q7TRN3 316 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Adam30Q811Q3 732 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc36a2Q8BHK3 478 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 HpgdQ8VCC1 269 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1151Q8VFQ8 308 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr734Q8VFT4 313 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr516Q8VFZ5 314 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr583Q8VG25 319 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tada1Q99LM9 335 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Exosc5Q9CRA8 235 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 CmipQ9D486 773 aa12.4□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lypd2Q9DD23 127 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms