RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 OSTF1Q92882 214 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 GTPBP3Q969Y2 492 aaKnown RBP11.66□□□□□ -0.54
PHGDH-218ENST00000641491 TIMP4Q99727 224 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 KLHDC3Q9BQ90 382 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 RSPO3Q9BXY4 272 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-218ENST00000641491 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 ZNF229Q9UJW7 825 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
PHGDH-218ENST00000641491 TNRC6AQ8NDV7 1962 aaKnown RBP11.66□□□□□ -0.54
PHGDH-218ENST00000641491 UNC119BA6NIH7 251 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 B4DXG7 233 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 MCIDASD6RGH6 385 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 RNF13O43567 381 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 CXCL13O43927 109 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PIP5K1CO60331 668 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 WDR1O75083 606 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 IGF2P01344 180 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 HOXD4P09016 255 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-218ENST00000641491 ZNF708P17019 499 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 FUT1P19526 365 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 IL11P20809 199 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 AHCYP23526 432 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 IGFBP5P24593 272 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 LHX2P50458 406 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 RAD23AP54725 363 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PER3P56645 1201 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 RAC3P60763 192 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 FOXK1P85037 733 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PRKCDQ05655 676 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 RIPK1Q13546 671 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 ANKDD1AQ495B1 522 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PRR30Q53SZ7 412 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TMEM225Q6GV28 225 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TBPL2Q6SJ96 375 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 GPAT4Q86UL3 456 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 CD163Q86VB7 1156 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 ST6GALNAC3Q8NDV1 305 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 OR9Q2Q8NGE9 314 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 OR5J2Q8NH18 312 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TEX47Q8TBZ9 253 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 MIB2Q96AX9 1013 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 KTI12Q96EK9 354 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TRIB1Q96RU8 372 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 CIB1Q99828 191 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PRSS27Q9BQR3 290 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PRRG3Q9BZD7 231 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 UCK2Q9BZX2 261 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TP63Q9H3D4 680 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-218ENST00000641491 PAPOLBQ9NRJ5 636 aaKnown RBP11.65□□□□□ -0.54
PHGDH-218ENST00000641491 MAN2C1Q9NTJ4 1040 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 TNFRSF10DQ9UBN6 386 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
PHGDH-218ENST00000641491 ZC3H12DA2A288 527 aaKnown RBP11.64□□□□□ -0.55
PHGDH-218ENST00000641491 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SLC22A20A6NK97 555 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 AHRRA9YTQ3 701 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 BLOC1S5-TXNDC5H3BN57 136 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 MGRN1O60291 552 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SEMA7AO75326 666 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 VAMP5O95183 116 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 RCBTB2O95199 551 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 THY1P04216 161 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 ADORA3P0DMS8 318 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 POU2F1P14859 743 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 CPN1P15169 458 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 FPR3P25089 353 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 GRPRP30550 384 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 HMGA2P52926 109 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 IST1P53990 364 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 CTBP2P56545 445 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 CLDN20P56880 219 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 PRPS1P60891 318 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 COX10Q12887 443 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SNCBQ16143 134 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 C3AR1Q16581 482 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 ZNF74Q16587 644 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 RFX4Q33E94 735 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 WDR88Q6ZMY6 472 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SLC43A2Q8N370 569 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SCAIQ8N9R8 606 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 OR4C15Q8NGM1 316 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 FAM57AQ8TBR7 257 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 TAAR8Q969N4 342 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 NPAS1Q99742 590 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 RASSF4Q9H2L5 321 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 CHST11Q9NPF2 352 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 TBC1D23Q9NUY8 699 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 CNTRLQ7Z7A1 2325 aa11.64□□□□□ -0.55
PHGDH-218ENST00000641491 IGKV1D-42A0A075B6H8 117 aa11.63□□□□□ -0.55
PHGDH-218ENST00000641491 TRGV8A0A0C4DH27 118 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms