RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 IL18R1Q13478 541 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 SLC10A1Q14973 349 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 TMEM176BQ3YBM2 270 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-210ENST00000641115 ANKDD1AQ495B1 522 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 Q6ZPB1 254 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-210ENST00000641115 ASB18Q6ZVZ8 466 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 NANOGNBQ7Z5D8 188 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 KDF1Q8NAX2 398 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-210ENST00000641115 MFSD8Q8NHS3 518 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 APOL4Q9BPW4 351 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 ASPNQ9BXN1 380 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 PLA2G12AQ9BZM1 189 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 NDRG4Q9ULP0 352 aaKnown RBP17.87■□□□□ 0.45
PHGDH-210ENST00000641115 B3GNT3Q9Y2A9 372 aa17.87■□□□□ 0.45
PHGDH-210ENST00000641115 IGF2RP11717 2491 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 PTPRQQ9UMZ3 2332 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 ZAR1LA6NP61 321 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 TFECO14948 347 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-210ENST00000641115 OPN1LWP04000 364 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 GFRA1P56159 465 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 PRPS1P60891 318 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 RPS4XP62701 263 aaKnown RBP17.86■□□□□ 0.45
PHGDH-210ENST00000641115 OR7A5Q15622 319 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 CLEC12AQ5QGZ9 265 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 SLC27A4Q6P1M0 643 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 CHERPQ8IWX8 916 aaKnown RBP17.86■□□□□ 0.45
PHGDH-210ENST00000641115 C8orf59Q8N0T1 100 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-210ENST00000641115 SLC43A2Q8N370 569 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 RBMXL3Q8N7X1 1067 aaKnown RBP17.86■□□□□ 0.45
PHGDH-210ENST00000641115 SETD9Q8NE22 299 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 OR8D4Q8NGM9 314 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 MUS81Q96NY9 551 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 TNFRSF13CQ96RJ3 184 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 TSSK6Q9BXA6 273 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 TEX12Q9BXU0 123 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 MFRPQ9BY79 579 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 NDEL1Q9GZM8 345 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 ACKR4Q9NPB9 350 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 CORINQ9Y5Q5 1042 aa17.86■□□□□ 0.45
PHGDH-210ENST00000641115 FTCDNL1E5RQL4 147 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 PTP4A3O75365 173 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 NDUFB2O95178 105 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 POU3F2P20265 443 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-210ENST00000641115 SHC1P29353 583 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 GGT2P36268 569 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 SMSP52788 366 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 KRT80Q6KB66 452 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 USP51Q70EK9 711 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 C9orf43Q8TAL5 461 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-210ENST00000641115 SAMD8Q96LT4 415 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 SLC6A15Q9H2J7 730 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 MCCC2Q9HCC0 563 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 IL20RAQ9UHF4 553 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 HIF3AQ9Y2N7 669 aa17.85■□□□□ 0.45
PHGDH-210ENST00000641115 LIPT2A6NK58 231 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 E9PQ18 207 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 BLOC1S5-TXNDC5H3BN57 136 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 FAM87AP0C7U9 286 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 IMPDH2P12268 514 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 MYF6P23409 242 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 GRPRP30550 384 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 SLC6A6P31641 620 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 GIPRP48546 466 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 FXYD6P3P58550 94 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 CDC42P60953 191 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 FHL1Q13642 323 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 GINS1Q14691 196 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 INAQ16352 499 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 CMPK2Q5EBM0 449 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 ZNF691Q5VV52 312 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 SLX4IPQ5VYV7 408 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 TMEM236Q5W0B7 351 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 OR2T33Q8NG76 320 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 OR5J2Q8NH18 312 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 FAM81AQ8TBF8 368 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 KLHL15Q96M94 604 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 PRRG3Q9BZD7 231 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 LDAHQ9H6V9 325 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 ZDHHC11Q9H8X9 412 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 SLC25A19Q9HC21 320 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 IMPAD1Q9NX62 359 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 ALKBH4Q9NXW9 302 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 TUBD1Q9UJT1 453 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 SLC6A5Q9Y345 797 aa17.84■□□□□ 0.45
PHGDH-210ENST00000641115 A0A1W2PNR3 127 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 CDK5Q00535 292 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 PMS2P3Q13401 168 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 SGCBQ16585 318 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 GXYLT1Q4G148 440 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 RNFT1Q5M7Z0 435 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 CASP12Q6UXS9 341 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 DEPDC4Q8N2C3 294 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 MARVELD2Q8N4S9 558 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 IQCF1Q8N6M8 205 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 SCAIQ8N9R8 606 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 MIB2Q96AX9 1013 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 IFT27Q9BW83 186 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 EXO5Q9H790 373 aa17.83■□□□□ 0.45
PHGDH-210ENST00000641115 MRPL39Q9NYK5 338 aaKnown RBP17.83■□□□□ 0.45
PHGDH-210ENST00000641115 TRAPPC4Q9Y296 219 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms