RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 I3L521 148 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 PLD2O14939 933 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 ENTPD6O75354 484 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 F8A1P23610 371 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 ETV5P41161 510 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 CRYBB2P43320 205 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 EFNA3P52797 238 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 PER3P56645 1201 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 IGLV3-21P80748 117 aaPredicted RBP10.57□□□□□ -0.72
CLN6-217ENST00000636964 SCN1BQ07699 218 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 STX19Q8N4C7 294 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 EID2Q8N6I1 236 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 SLC37A3Q8NCC5 494 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 TEX12Q9BXU0 123 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 OR8D2Q9GZM6 311 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 CLCA3PQ9Y6N3 262 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 EFCAB10A6NFE3 127 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 TLX2O43763 284 aaPredicted RBP10.57□□□□□ -0.72
CLN6-217ENST00000636964 FUT1P19526 365 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 HOXA6P31267 233 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 GIPRP48546 466 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 DIO1P49895 249 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 CHAF1BQ13112 559 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 NDUFAF6Q330K2 333 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 GRHL3Q8TE85 626 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 SAP25Q8TEE9 199 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 EDAQ92838 391 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 SENP5Q96HI0 755 aaPredicted RBP10.57□□□□□ -0.72
CLN6-217ENST00000636964 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 NLGN3Q9NZ94 848 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 SERTAD3Q9UJW9 196 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
CLN6-217ENST00000636964 RPS10-NUDT3A0A1W2PQS6 291 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 SMIM30A4D0T7 59 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 LRRTM2O43300 516 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PRKYO43930 277 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CH25HO95992 272 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 THBS1P07996 1170 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 HOXD4P09016 255 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 CT45A8P0DMV1 189 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CT45A9P0DMV2 189 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PRKAR1AP10644 381 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 TDGF1P13385 188 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 RPS4Y1P22090 263 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 MXD1Q05195 221 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 POU4F3Q15319 338 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 OR1Q1Q15612 314 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 EIPR1Q53HC9 387 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CT45A2Q5DJT8 189 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 FAM131AQ6UXB0 335 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 WDR88Q6ZMY6 472 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 WDR5BQ86VZ2 330 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CA5BP1Q8WTZ4 195 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PTPMT1Q8WUK0 201 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 RADILQ96JH8 1075 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 SLC41A2Q96JW4 573 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 GPR137Q96N19 417 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CLEC2DQ9UHP7 191 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 A0A1W2PQM1 296 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PSMD9O00233 223 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PRAMEF2O60811 474 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 S100A9P06702 114 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 OMPP47874 163 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 AGFG1P52594 562 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 CCL7P80098 99 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 GALEQ14376 348 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PDSS1Q5T2R2 415 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 TEX261Q6UWH6 196 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CFAP77Q6ZQR2 320 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ZNF367Q7RTV3 350 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 RANBP3LQ86VV4 465 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ZBTB44Q8NCP5 570 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 OR8D4Q8NGM9 314 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 OR4C3Q8NH37 302 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PIGXQ8TBF5 258 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ACOT11Q8WXI4 607 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 LMF2Q9BU23 707 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 CHRNA10Q9GZZ6 450 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 B3GAT2Q9NPZ5 323 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PLEKHB1Q9UF11 243 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 GPR52Q9Y2T5 361 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 LSM2Q9Y333 95 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 PRELID3BQ9Y3B1 194 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 CMAHPQ9Y471 501 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 U3KQ87 197 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 LY6G6EA0A0G2JKS1 128 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 GTPBP1O00178 669 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 CD63P08962 238 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 TSC22D1Q15714 1073 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ARHGAP40Q5TG30 622 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 PRPF38BQ5VTL8 546 aaKnown RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 WDR74Q6RFH5 385 aaPredicted RBP10.56□□□□□ -0.72
CLN6-217ENST00000636964 C5orf46Q6UWT4 87 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ZNF615Q8N8J6 731 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 OR11H4Q8NGC9 324 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 GNPDA2Q8TDQ7 276 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ADAMTS18Q8TE60 1221 aa10.56□□□□□ -0.72
CLN6-217ENST00000636964 ZNF501Q96CX3 271 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms