RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 OR9K2Q8NGE7 335 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 NFKBIDQ8NI38 313 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 TMEM45BQ96B21 275 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 TRMT61AQ96FX7 289 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 SF3B5Q9BWJ5 86 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 ALG2Q9H553 416 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 SLC7A10Q9NS82 523 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 FAIMQ9NVQ4 179 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 CISD1Q9NZ45 108 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 SLAMF8Q9P0V8 285 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 RPS6KB2Q9UBS0 482 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 POU2F3Q9UKI9 436 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 CORO2BQ9UQ03 480 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 MAGED1Q9Y5V3 778 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.29
CACNA1A-230ENST00000636768 VPS13CQ709C8 3753 aa13.21□□□□□ -0.3
CACNA1A-230ENST00000636768 RAI1Q7Z5J4 1906 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 SHISA9B4DS77 424 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 KRT33AO76009 404 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 LY6G6DO95868 133 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 ARAFP10398 606 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 ETS2P15036 469 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 GTF2E2P29084 291 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 CDKN1AP38936 164 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 ATP4BP51164 291 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 IRX1P78414 480 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 GABRA6Q16445 453 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 KRTAP21-3Q3LHN1 58 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 PAGE3Q5JUK9 113 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC22A25Q6T423 547 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 RADILQ96JH8 1075 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 SLCO5A1Q9H2Y9 848 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 RABEP2Q9H5N1 569 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 TMEM45AQ9NWC5 275 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 VAPAQ9P0L0 249 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 DCTN4Q9UJW0 460 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 MGAT4BQ9UQ53 548 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 ARID1AO14497 2285 aa13.2□□□□□ -0.3
CACNA1A-230ENST00000636768 ELOA3DA6NLF2 546 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 EVPLLA8MZ36 301 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 TMEM229AB2RXF0 380 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 M0R1B8 84 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 PDLIM1O00151 329 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 PTAFRP25105 342 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 PRKAR1BP31321 381 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 CDK6Q00534 326 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 PGGHGQ32M88 737 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 ELOA3BQ3SY89 546 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 REEP3Q6NUK4 255 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 KLHL24Q6TFL4 600 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 ABHD12BQ7Z5M8 362 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 C17orf78Q8N4C9 275 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 POMGNT2Q8NAT1 580 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 ELOA3Q8NG57 546 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 STK35Q8TDR2 534 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 ZNF385AQ96PM9 386 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 PIF1Q9H611 641 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 AMDHD2Q9Y303 409 aa13.19□□□□□ -0.3
CACNA1A-230ENST00000636768 DSCAMO60469 2012 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 OVOL3O00110 214 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 NPIPB7O75200 414 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 VAMP5O95183 116 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 CDH2P19022 906 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC6A2P23975 617 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 CD40P25942 277 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 MPGP29372 298 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 RPS5P46782 204 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 NCALDP61601 193 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SPOCK1Q08629 439 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SCARB2Q14108 478 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 VEZF1Q14119 521 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 ETFDHQ16134 617 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 ZIC4Q8N9L1 334 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 TRAF4Q9BUZ4 470 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 AMBRA1Q9C0C7 1298 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC52A3Q9NQ40 469 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC17A5Q9NRA2 495 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 RASD1Q9Y272 281 aa13.18□□□□□ -0.3
CACNA1A-230ENST00000636768 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms