RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 BBS1Q8NFJ9 593 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 OR1J2Q8NGS2 313 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ASB11Q8WXH4 323 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 TANKQ92844 425 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 OPALINQ96PE5 141 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 OR7D2Q96RA2 312 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 TLR9Q9NR96 1032 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 PLSCR1O15162 318 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 AOAHP28039 575 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 MEOX2P50222 304 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 OR1Q1Q15612 314 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 NAXDQ8IW45 347 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 OR4D10Q8NGI6 311 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 NEIL2Q969S2 332 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 LMF2Q9BU23 707 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 TOLLIPQ9H0E2 274 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 HIDE1A8MVS5 230 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 TMX2-CTNND1H3BSU7 103 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 GPR171O14626 319 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SERPINA7P05543 415 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 NAGAP17050 411 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SRMP19623 302 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ETV5P41161 510 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 FXYD4P59646 89 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SRPXP78539 464 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 GLO1Q04760 184 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SGCAQ16586 387 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 KATNB1Q9BVA0 655 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 KLHL13Q9P2N7 655 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 STRAPQ9Y3F4 350 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 TMEM225BP0DP42 221 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 KCNJ5P48544 419 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 DAP3P51398 398 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 ZNF74Q16587 644 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 COL13A1Q5TAT6 717 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 WDR88Q6ZMY6 472 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 P4HA3Q7Z4N8 544 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SLC38A5Q8WUX1 472 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 RNF170Q96K19 258 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 IL17FQ96PD4 163 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 MYEF2Q9P2K5 600 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 C20orf202A1L168 122 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 MEIS3P2A8K0S8 358 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 MT-ND4LP03901 98 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 MC3RP41968 323 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 RIN1Q13671 783 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 ARHGAP19Q14CB8 494 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 B3GLCTQ6Y288 498 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 KLK6Q92876 244 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 TBC1D20Q96BZ9 403 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 SORBS1Q9BX66 1292 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 METTL7AQ9H8H3 244 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 EHFQ9NZC4 300 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 KIAA1551Q9HCM1 1747 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 LOC100289279A0A1B0GTE1 492 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 STC2O76061 302 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 HTR2CP28335 458 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 RAG2P55895 527 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 GPR18Q14330 331 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 GRM7Q14831 915 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 NFATC4Q14934 902 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 RAB30Q15771 203 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 FXNQ16595 210 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 SYT14P1Q58G82 188 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 TRNP1Q6NT89 227 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 GATSQ8NAP1 163 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 ARRDC2Q8TBH0 407 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 RBMXL1Q96E39 390 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 NOX4Q9NPH5 578 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 CCDC88CQ9P219 2028 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 KDM4FA0A1W2PPD8 638 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 LGALS8O00214 317 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 RNH1P13489 461 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 KCNJ10P78508 379 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 CRHR2Q13324 411 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 CDS1Q92903 461 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 STRADBQ9C0K7 418 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 GAR1Q9NY12 217 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 GHRLQ9UBU3 117 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 TIMM8BQ9Y5J9 83 aaPredicted RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 TNRC6CQ9HCJ0 1690 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 CLEC3AO75596 197 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 JTBO76095 146 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 EMP2P54851 167 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 ACY1Q03154 408 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 MPEG1Q2M385 716 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 IL34Q6ZMJ4 242 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 MRPL10Q7Z7H8 261 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 CERS4Q9HA82 394 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
VCL-206ENST00000623461 CD300LBA8K4G0 201 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 OR2T1O43869 369 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 LILRB5O75023 590 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 GALTP07902 379 aa8.3□□□□□ -1.08
VCL-206ENST00000623461 SLC35D3Q5M8T2 416 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms