RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SNX20Q7Z614 316 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PLCZ1Q86YW0 608 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TGIF2LXQ8IUE1 241 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 RBM45Q8IUH3 476 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 CCDC50Q8IVM0 306 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 LRRC8AQ8IWT6 810 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NELFCDQ8IXH7 590 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GABRG1Q8N1C3 465 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 SNX31Q8N9S9 440 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 COLGALT1Q8NBJ5 622 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 CHDHQ8NE62 594 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 OR5T3Q8NGG3 340 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 OR4F5Q8NH21 305 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ENKURQ8TC29 256 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 UBTD2Q8WUN7 234 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 CACNG8Q8WXS5 425 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ST8SIA1Q92185 356 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PNPLA2Q96AD5 504 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 RAB3CQ96E17 227 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PLEKHA8Q96JA3 519 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 VSTM2LQ96N03 204 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 MAPKAP1Q9BPZ7 522 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TTYH2Q9BSA4 534 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 C20orf24Q9BUV8 137 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 POTEKPQ9BYX7 375 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TM6SF2Q9BZW4 377 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TRIM9Q9C026 710 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GANQ9H2C0 597 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ELOVL6Q9H5J4 265 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 DCLRE1BQ9H816 532 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 IL1RL2Q9HB29 575 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 MCCC2Q9HCC0 563 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PLSCR3Q9NRY6 295 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 UFSP2Q9NUQ7 469 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PLEK2Q9NYT0 353 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 MLXQ9UH92 298 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GGA2Q9UJY4 613 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF490Q9ULM2 529 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 RPH3ALQ9UNE2 315 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ATG4BQ9Y4P1 393 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PPIAL4AQ9Y536 164 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PLB1Q6P1J6 1458 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ATP10DQ9P241 1426 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 FRMPD4Q14CM0 1322 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 SMCO3A2RU48 225 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CCT8L1PA6NM43 557 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 OR5K4A6NMS3 321 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 SERPINE3A8MV23 424 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 GOLGA8RI6L899 631 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CCSO14618 274 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 SYT7O43581 403 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 KIAA0513O60268 411 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ANXA9O76027 345 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NDUFA7O95182 113 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CST1P01037 141 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PNMA6AP0CW24 399 aaPredicted RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 B4GALT1P15291 398 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 GPX3P22352 226 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PSMA2P25787 234 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CD40LGP29965 261 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CASP14P31944 242 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PPP1R2P41236 205 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 RGRP47804 291 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 HSPA13P48723 471 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ARRB1P49407 418 aaPredicted RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 TPMTP51580 245 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NDST1P52848 882 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CLDN18P56856 261 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 GPX6P59796 221 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PRPS1P60891 318 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PSMC5P62195 406 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 POLR2GP62487 172 aaKnown RBP eCLIP3□□□□□ -1.93
BRCA1-229ENST00000621897 CDK16Q00536 496 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PAX5Q02548 391 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 IRF8Q02556 426 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NME3Q13232 169 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 ITGB3BPQ13352 177 aaPredicted RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 PIGHQ14442 188 aaPredicted RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 GANABQ14697 944 aaKnown RBP3□□□□□ -1.93
BRCA1-229ENST00000621897 HEPACAMQ14CZ8 416 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 EMC2Q15006 297 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PON2Q15165 354 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 TGIF1Q15583 401 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 SYPL1Q16563 259 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 MICBQ29980 383 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 XKR4Q5GH76 650 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM31Q5JXX7 168 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PPP1R2P3Q6NXS1 205 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 CYP4Z1Q86W10 505 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NUDCD3Q8IVD9 361 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 FAM86B1Q8N7N1 296 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 FBXL13Q8NEE6 735 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 PROKR2Q8NFJ6 384 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 OR5T1Q8NG75 326 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 OR7G2Q8NG99 324 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 RHEBL1Q8TAI7 183 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 FANK1Q8TC84 345 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 TCP11Q8WWU5 503 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 NRGNQ92686 78 aa3□□□□□ -1.93
BRCA1-229ENST00000621897 GLYATL1Q969I3 302 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms