RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LOC101059948A0A1B0GTJ6 334 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 FAM47E-STBD1D6RA91 191 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 AHSA1O95433 338 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 HIST1H1CP16403 213 aaKnown RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 TGFBR2P37173 567 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 LIPAP38571 399 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SH3BGRP55822 239 aaPredicted RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 RPS7P62081 194 aaKnown RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.45■□□□□ 0.7
SPAST-204ENST00000621856 Q0VFX4 171 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 CHAF1BQ13112 559 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SNTA1Q13424 505 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ALG10Q5BKT4 473 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ZNF362Q5T0B9 420 aaPredicted RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 C1orf140Q5VVS0 124 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 NANOGP1Q8N7R0 232 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SDR9C7Q8NEX9 313 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 OR4K17Q8NGC6 315 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SLC25A36Q96CQ1 311 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 GPX7Q96SL4 187 aaPredicted RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 HCAR1Q9BXC0 346 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 OR51V1Q9H2C8 321 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 GPN2Q9H9Y4 310 aaPredicted RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 CPNE5Q9HCH3 593 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 NRIP3Q9NQ35 241 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 HPF1Q9NWY4 346 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SLC6A5Q9Y345 797 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 KNTC1P50748 2209 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 TERTO14746 1132 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 GABARAPO95166 117 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 MT-ATP6P00846 226 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 UQCRC1P31930 480 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 APOBEC1P41238 236 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 ETV1P50549 477 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 SLC16A1P53985 500 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 GABREP78334 506 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 FOXF1Q12946 379 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 C1DQ13901 141 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 PAQR6Q6TCH4 344 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 C5orf46Q6UWT4 87 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 MAMDC2Q7Z304 686 aaPredicted RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 MARCH9Q86YJ5 346 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 PROKR2Q8NFJ6 384 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 OR2M3Q8NG83 312 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 OR4F15Q8NGB8 312 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 PTP4A1Q93096 173 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 SECISBP2Q96T21 854 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 MGLLQ99685 303 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 BCL7BQ9BQE9 202 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 B3GNT4Q9C0J1 378 aa19.44■□□□□ 0.7
SPAST-204ENST00000621856 EXOGQ9Y2C4 368 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 MRPS18BQ9Y676 258 aaKnown RBP19.44■□□□□ 0.7
SPAST-204ENST00000621856 A0A1W2PPW3 197 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 ARPC3O15145 178 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 IDH3BO43837 385 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 SERPINA7P05543 415 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 PEX19P40855 299 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 CTXN1P60606 82 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 RPL18Q07020 188 aaKnown RBP19.43■□□□□ 0.7
SPAST-204ENST00000621856 FAM69AQ5T7M9 428 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 ARMC10Q8N2F6 343 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 SIRT6Q8N6T7 355 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 RELTQ969Z4 430 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 NPAS1Q99742 590 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 PTDSS2Q9BVG9 487 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 OR11A1Q9GZK7 315 aa19.43■□□□□ 0.7
SPAST-204ENST00000621856 LSM2Q9Y333 95 aaKnown RBP19.43■□□□□ 0.7
SPAST-204ENST00000621856 SLC22A31A6NKX4 558 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 NPIPB7O75200 414 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 CD14P08571 375 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 LSAMPQ13449 338 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 SPHARQ15513 63 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 INPP5JQ15735 1006 aaPredicted RBP19.42■□□□□ 0.7
SPAST-204ENST00000621856 CTF1Q16619 201 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 TSTQ16762 297 aaKnown RBP19.42■□□□□ 0.7
SPAST-204ENST00000621856 ARMC4Q5T2S8 1044 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 TMEM81Q6P7N7 255 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 B3GLCTQ6Y288 498 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 TMPRSS12Q86WS5 348 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 LRRC75AQ8NAA5 344 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 OR51G2Q8NGK0 314 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 RASD2Q96D21 266 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 FAM117AQ9C073 453 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 RACGAP1Q9H0H5 632 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 RYDENQ9NUL5 291 aaKnown RBP19.42■□□□□ 0.7
SPAST-204ENST00000621856 TNFRSF10DQ9UBN6 386 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 PCSK5Q92824 1860 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 EML6Q6ZMW3 1958 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 SERPINI2O75830 405 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 F13BP05160 661 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 CCL3P10147 92 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 CLUP10909 449 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 DLX5P56178 289 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 LSM3P62310 102 aaKnown RBP19.42■□□□□ 0.7
SPAST-204ENST00000621856 NFATC3Q12968 1075 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 TMED1Q13445 227 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 ATP1A4Q13733 1029 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 PLPPR5Q32ZL2 321 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 SLC22A10Q63ZE4 541 aa19.42■□□□□ 0.7
SPAST-204ENST00000621856 ATP6V1C2Q8NEY4 427 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms