RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ASB15Q8WXK1 588 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 TM9SF4Q92544 642 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 ZNF587Q96SQ5 575 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 PDCD1LG2Q9BQ51 273 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 TUBA1CQ9BQE3 449 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 P4HTMQ9NXG6 502 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 SIGLEC7Q9Y286 467 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 DSPPQ9NZW4 1301 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 IGKV3D-11A0A0A0MRZ8 115 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 CCDC163A0A0D9SF12 145 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 SMIM31A0A1B0GVY4 71 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 FITM1A5D6W6 292 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 OR6C68A6NDL8 312 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 CTDSP2O14595 271 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 CDK1P06493 297 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 ALDH3B2P48448 385 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 POU3F1Q03052 451 aaPredicted RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 EGR4Q05215 589 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 FGFBP1Q14512 234 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 ALG10Q5BKT4 473 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 AP1ARQ63HQ0 302 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 C16orf87Q6PH81 154 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 RPS19BP1Q86WX3 136 aaKnown RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 LSM14AQ8ND56 463 aaKnown RBP9.57□□□□□ -0.88
VPS11-208ENST00000621676 DUSP21Q9H596 190 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 GNG8Q9UK08 70 aa9.57□□□□□ -0.88
VPS11-208ENST00000621676 LRP4O75096 1905 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZFAND5O76080 213 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 OR5F1O95221 314 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 SLC2A1P11166 492 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 DRD5P21918 477 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 PCMT1P22061 227 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CDKN2AP42771 156 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 RPS15P62841 145 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 IL10RAQ13651 578 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 KLHL26Q53HC5 615 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CMPK2Q5EBM0 449 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 PLAG1Q6DJT9 500 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 DPY19L4Q7Z388 723 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 PRSS42Q7Z5A4 293 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 HSD17B8Q92506 261 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 GABARAPL3Q9BY60 117 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 RBM38Q9H0Z9 239 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 DCSTAMPQ9H295 470 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 HPF1Q9NWY4 346 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CORINQ9Y5Q5 1042 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 COL4A2P08572 1712 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZGRF1Q86YA3 2104 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMED7-TICAM2A0A0A6YYA0 188 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 A0A0B4J203 849 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 WISP2O76076 250 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CCDC159P0C7I6 412 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 AGFG1P52594 562 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 PSMD4P55036 377 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 RPS25P62851 125 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 ROR2Q01974 943 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 RPL18Q07020 188 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 C3P1Q6ZMU1 363 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZNF550Q7Z398 422 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZNF433Q8N7K0 673 aaPredicted RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 OR13F1Q8NGS4 319 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 OR14A16Q8NHC5 309 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZC3H10Q96K80 434 aaKnown RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 WDR76Q9H967 626 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 MCCC2Q9HCC0 563 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ABCB10Q9NRK6 738 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 GRHPRQ9UBQ7 328 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TCFL5Q9UL49 500 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMED7Q9Y3B3 224 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMEM72A0PK05 275 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 SYT5O00445 386 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CHP2O43745 196 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 SLC16A7O60669 478 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 RFPL3SP0C7P2 107 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 CDAP32320 146 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 GABREP78334 506 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 SLX4IPQ5VYV7 408 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMEM225Q6GV28 225 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 DHRS4L2Q6PKH6 230 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 SNX33Q8WV41 574 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 OSTF1Q92882 214 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMEM80Q96HE8 168 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 ZNF285Q96NJ3 590 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
VPS11-208ENST00000621676 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 NUAK2Q9H093 628 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 COMMD3Q9UBI1 195 aa9.56□□□□□ -0.88
VPS11-208ENST00000621676 TMEM200CA6NKL6 621 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 FLRT2O43155 660 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 CDRT1O95170 752 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 IL33O95760 270 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 E2F1Q01094 437 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 SKP2Q13309 424 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 RABEPKQ7Z6M1 372 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 EGFL6Q8IUX8 553 aa9.55□□□□□ -0.88
VPS11-208ENST00000621676 CYP4Z2PQ8N1L4 340 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms