RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 NANOGP8Q6NSW7 305 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 FCRLAQ7L513 359 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 BHLHA15Q7RTS1 189 aaPredicted RBP6.93□□□□□ -1.3
CLK1-215ENST00000621181 NUFIP2Q7Z417 695 aaKnown RBP6.93□□□□□ -1.3
CLK1-215ENST00000621181 HTRA1Q92743 480 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 VPS33AQ96AX1 596 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 CCT7Q99832 543 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 ADI1Q9BV57 179 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 C19orf24Q9BVV8 132 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 CACNG6Q9BXT2 260 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 NANOGQ9H9S0 305 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 NTN4Q9HB63 628 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 TAS2R7Q9NYW3 318 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 LPAR3Q9UBY5 353 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 EGFL7Q9UHF1 273 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 POU2F3Q9UKI9 436 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 B3GALT5Q9Y2C3 310 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 MALRD1Q5VYJ5 2156 aa6.93□□□□□ -1.3
CLK1-215ENST00000621181 GJE1A6NN92 205 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SHISA9B4DS77 424 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 SCDO00767 359 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SLC22A3O75751 556 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 PRKD3O94806 890 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 YES1P07947 543 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 NGFRP08138 427 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 PRPS2P11908 318 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 FCGR1AP12314 374 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ELK4P28324 431 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SHC1P29353 583 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 POLR2JP52435 117 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 CDH15P55291 814 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 DSCR9P59020 149 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ADARB1P78563 741 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 MERTKQ12866 999 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 FOXF1Q12946 379 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 NFYCQ13952 458 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 FAM71E1Q6IPT2 247 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 RNF165Q6ZSG1 346 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 Q6ZT83 130 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZNF551Q7Z340 670 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 ERI1Q8IV48 349 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 MISPQ8IVT2 679 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 CDRT4Q8N9R6 151 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 OR10H5Q8NGA6 315 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 B4GALNT2Q8NHY0 566 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 FBXO30Q8TB52 745 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 DOK1Q99704 481 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 C9orf16Q9BUW7 83 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SRXN1Q9BYN0 137 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 MYNNQ9NPC7 610 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 UBQLN4Q9NRR5 601 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 TMEM160Q9NX00 188 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 RSL24D1Q9UHA3 163 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 LEF1Q9UJU2 399 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 OAZ3Q9UMX2 235 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 USP22Q9UPT9 525 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 POLR3HQ9Y535 204 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 YLPM1P49750 1951 aaKnown RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 A0A087WXM4 84 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 A0A096LNT2 108 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZNF814B7Z6K7 855 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 J3QL48 77 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 KCNK2O95069 426 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SLC25A16P16260 332 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SRD5A1P18405 259 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 HPCAP84074 193 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 LOXL1Q08397 574 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 TMEM176BQ3YBM2 270 aaPredicted RBP6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZBED5Q49AG3 693 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 TBPL2Q6SJ96 375 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SLC22A25Q6T423 547 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SLC43A2Q8N370 569 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ZNF525Q8N782 197 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 ATP6V1C2Q8NEY4 427 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 POC1BQ8TC44 478 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 FAM168AQ92567 244 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 RADILQ96JH8 1075 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 SIRT5Q9NXA8 310 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 KLHL9Q9P2J3 617 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 AURKCQ9UQB9 309 aa6.92□□□□□ -1.3
CLK1-215ENST00000621181 IGHV3-15A0A0B4J1V0 119 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CCDC154A6NI56 674 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 LSM1O15116 133 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 PDPK1O15530 556 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 RSL1D1O76021 490 aaKnown RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 NKX2-2O95096 273 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 STAMBPO95630 424 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 NCK1P16333 377 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
CLK1-215ENST00000621181 GGT1P19440 569 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 ENPP1P22413 925 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 TTKP33981 857 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 CAPGP40121 348 aa6.91□□□□□ -1.3
CLK1-215ENST00000621181 PRIM2P49643 509 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms