RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CPOQ8IVL8 374 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 GLB1L2Q8IW92 636 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 RNF113BQ8IZP6 322 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 CPEB3Q8NE35 698 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 ABHD4Q8TB40 342 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SMARCD2Q92925 531 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 DVL3Q92997 716 aaPredicted RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 CPEB1Q9BZB8 566 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 CBLN4Q9NTU7 201 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 FTSJ1Q9UET6 329 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
PDE6A-205ENST00000617647 BTAF1O14981 1849 aa6.87□□□□□ -1.31
PDE6A-205ENST00000617647 IL5P05113 134 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CSF1P09603 554 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 F3P13726 295 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 RASGEF1BQ0VAM2 473 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 DCAF12L2Q5VW00 463 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 C19orf48Q6RUI8 117 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 TMPRSS12Q86WS5 348 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 TEX19Q8NA77 164 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 OR5M8Q8NGP6 311 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PPP1R1CQ8WVI7 109 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 KHSRPQ92945 711 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 HMCESQ96FZ2 354 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SPATA33Q96N06 139 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CBLCQ9ULV8 474 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SLC22A14Q9Y267 594 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 COLCA2A8K830 154 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SAP18O00422 153 aaKnown RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ZNF821O75541 412 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 EDN1P05305 212 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PGAM2P15259 253 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 MUC1P15941 1255 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SCNN1AP37088 669 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 OR12D2P58182 307 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 STXBP1P61764 594 aaKnown RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SIM1P81133 766 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 FNDC3BQ53EP0 1204 aaKnown RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CHST4Q8NCG5 386 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 THEM6Q8WUY1 208 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ECHDC3Q96DC8 303 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SLC6A7Q99884 636 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 OR2AG1Q9H205 316 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 POFUT1Q9H488 388 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 TMEM27Q9HBJ8 222 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CNIH4Q9P003 139 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PPT2Q9UMR5 302 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 LHX6Q9UPM6 363 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SLC35A3Q9Y2D2 325 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 FBXO7Q9Y3I1 522 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 NME7Q9Y5B8 376 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 FER1L6Q2WGJ9 1857 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 KDM4FA0A1W2PPD8 638 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ACOD1A6NK06 481 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 RIIAD1A6NNX1 92 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 HEPACAM2A8MVW5 462 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 MOSPD3O75425 235 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 AK1P00568 194 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 RPLP2P05387 115 aaKnown RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SFTPBP07988 381 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CST2P09228 141 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CDKN1CP49918 316 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SULT1A1P50225 295 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PNLIPRP2P54317 469 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 STARD6P59095 220 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CD81P60033 236 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 HSPB3Q12988 150 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ZNF177Q13360 481 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 IKZF1Q13422 519 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PCBP2Q15366 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SLC10A6Q3KNW5 377 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 SLC36A2Q495M3 483 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ATPAF1Q5TC12 328 aaPredicted RBP6.86□□□□□ -1.31
PDE6A-205ENST00000617647 C11orf87Q6NUJ2 197 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ACSM5Q6NUN0 579 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 DEGS2Q6QHC5 323 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 TMEM205Q6UW68 189 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 Q6ZRG5 221 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 LANCL3Q6ZV70 420 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 RABEPKQ7Z6M1 372 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 CMTM4Q8IZR5 234 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ZBTB2Q8N680 514 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 OR11G2Q8NGC1 345 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PHB2Q99623 299 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 ORAI3Q9BRQ5 295 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 WBP1LQ9NX94 342 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 PIM2Q9P1W9 311 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 FBXW2Q9UKT8 454 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 V9GYS6 101 aa6.86□□□□□ -1.31
PDE6A-205ENST00000617647 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 PEX12O00623 359 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 YY2O15391 372 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 GALR3O60755 368 aaPredicted RBP6.85□□□□□ -1.31
PDE6A-205ENST00000617647 CYB5AP00167 134 aa6.85□□□□□ -1.31
PDE6A-205ENST00000617647 HTR2CP28335 458 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms