RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 SHPKQ9UHJ6 478 aa9.56□□□□□ -0.88
CUL4A-212ENST00000617546 ICKQ9UPZ9 632 aa9.56□□□□□ -0.88
CUL4A-212ENST00000617546 M0R082 166 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 FKTNO75072 461 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 JTBO76095 146 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 SERPINA5P05154 406 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 C6P13671 934 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 HIST1H1TP22492 207 aaPredicted RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 HOXC12P31275 282 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 DEFB134Q4QY38 66 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 MRPL41Q8IXM3 137 aaKnown RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 GLYATL2Q8WU03 294 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 C14orf79Q96F83 325 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 HRASLSQ9HDD0 168 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KLHL13Q9P2N7 655 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 BCL2L11O43521 198 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 MPIG6BO95866 241 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 SYN1P17600 705 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 MMP11P24347 488 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 CX3CR1P49238 355 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 PLCXD2Q0VAA5 305 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 GRM7Q14831 915 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KANSL1Q7Z3B3 1105 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 LRRTM3Q86VH5 581 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 PGBD5Q8N414 524 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 TRMT2BQ96GJ1 504 aaKnown RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 IGSF21Q96ID5 467 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 ZDHHC5Q9C0B5 715 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 CYSLTR2Q9NS75 346 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 IL20RAQ9UHF4 553 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 SLCO3A1Q9UIG8 710 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 GMEB2Q9UKD1 530 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 PPT2Q9UMR5 302 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KNG1P01042 644 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 ACSM4P0C7M7 580 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KIAA0141Q14154 515 aaPredicted RBP9.55□□□□□ -0.88
CUL4A-212ENST00000617546 VRK2Q86Y07 508 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 LHFPL5Q8TAF8 219 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 CHAC2Q8WUX2 184 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 APH1BQ8WW43 257 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 RAB3CQ96E17 227 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 WDR76Q9H967 626 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 NOX4Q9NPH5 578 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 PRSS16Q9NQE7 514 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 A6NIN4 97 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 SURF4O15260 269 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 KIR2DS3Q14952 304 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 LY6G5CQ5SRR4 150 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 ST7LQ8TDW4 575 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 SMIM4Q8WVI0 70 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 CDS1Q92903 461 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 RNF167Q9H6Y7 350 aa9.55□□□□□ -0.88
CUL4A-212ENST00000617546 VSTM2BA6NLU5 285 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 H3BSH0 61 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 TRIM77I1YAP6 450 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SOD1P00441 154 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 NFYBP25208 207 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 REEP5Q00765 189 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 TNFRSF17Q02223 184 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 CNN3Q15417 329 aaKnown RBP9.54□□□□□ -0.88
CUL4A-212ENST00000617546 C12orf73Q69YU5 71 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 C1orf87Q8N0U7 546 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 UBE2FQ969M7 185 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
CUL4A-212ENST00000617546 RNF32Q9H0A6 362 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 CXorf36Q9H7Y0 433 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SLAMF7Q9NQ25 335 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 PHLPP1O60346 1717 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 TP53I11O14683 189 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 CHRM2P08172 466 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SSTP61278 116 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 ACSM1Q08AH1 577 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 TMEM225Q6GV28 225 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 TMEM179BQ7Z7N9 219 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 GKN2Q86XP6 184 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 LINC01599Q8WXQ3 324 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SPTSSAQ969W0 71 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 WDR92Q96MX6 357 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 ZNF442Q9H7R0 627 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 METTL7AQ9H8H3 244 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 BCORQ6W2J9 1755 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 DFFBO76075 338 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SLCO2B1O94956 709 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SIX6O95475 246 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 HOXD9P28356 352 aaPredicted RBP9.54□□□□□ -0.88
CUL4A-212ENST00000617546 SHC2P98077 582 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 ID2Q02363 134 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 C8orf82Q6P1X6 216 aaPredicted RBP9.54□□□□□ -0.88
CUL4A-212ENST00000617546 KCNG3Q8TAE7 436 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 CSF3RQ99062 836 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 UBQLN3Q9H347 655 aa9.54□□□□□ -0.88
CUL4A-212ENST00000617546 MCCC2Q9HCC0 563 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms