RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 FITM1A5D6W6 292 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 FOXS1O43638 330 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 DNAJB6O75190 326 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RCBTB2O95199 551 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CBX7O95931 251 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TCRBP04435 133 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TFPIP10646 304 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC2A5P22732 501 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ADH7P40394 386 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PSMD4P55036 377 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SKP1P63208 163 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PLAURQ03405 335 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TRAM1Q15629 374 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CEACAM19Q7Z692 300 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NRMQ8IXM6 262 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZNF595Q8IYB9 648 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CARFQ8N187 725 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MEIOBQ8N635 442 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CSNK1A1LQ8N752 337 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OR13H1Q8NG92 308 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM255BQ8WV15 326 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 AHCYL2Q96HN2 611 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MNTQ99583 582 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 UBQLN3Q9H347 655 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM138Q9NPI0 162 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CD207Q9UJ71 328 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SERTAD3Q9UJW9 196 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC7A7Q9UM01 511 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 AK6Q9Y3D8 172 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NUP210LQ5VU65 1888 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TCRBV21S2A2A0A5A6 115 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ANKRD34CP0C6C1 535 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 BMP8BP34820 402 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GABRA4P48169 554 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SIM1P81133 766 aaPredicted RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TNK1Q13470 666 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GAS6Q14393 721 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MAPK14Q16539 360 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CPOQ8IVL8 374 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM52Q8NDY8 209 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TRMT10AQ8TBZ6 339 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 KCTD12Q96CX2 325 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RBP7Q96R05 134 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 AIFM2Q9BRQ8 373 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ARL6Q9H0F7 186 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZNF768Q9H5H4 540 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CMC2Q9NRP2 79 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TMEM74BQ9NUR3 256 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SDHAF2Q9NX18 166 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SIDT1Q9NXL6 827 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MRPS2Q9Y399 296 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 A0A1B0GTQ1 180 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 LILRA5A6NI73 299 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TOR1AO14656 332 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 HCN1O60741 890 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC43A1O75387 559 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 H2AFB2P0C5Z0 115 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 GRPRP30550 384 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ERVK-25P63136 954 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SNTB2Q13425 540 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MEPCEQ7L2J0 689 aaKnown RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SYT13Q7L8C5 426 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 KLHL36Q8N4N3 616 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TEX19Q8NA77 164 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 OR52B4Q8NGK2 314 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SLC37A2Q8TED4 501 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SGTBQ96EQ0 304 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TIMP4Q99727 224 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 RNF32Q9H0A6 362 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 PPP1R3EQ9H7J1 279 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZFP64Q9NPA5 681 aa9.98□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPC4 97 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CDC42EP2O14613 210 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ARPC1BO15143 372 aaKnown RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CTNSO60931 367 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TFP02787 698 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TRAPPC2P0DI81 140 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 TRAPPC2BP0DI82 140 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 FHL1Q13642 323 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MFSD13AQ14CX5 517 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 MRPL2Q5T653 305 aaKnown RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NIPAL3Q6P499 406 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 FAM198BQ6UWH4 519 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 NHLRC1Q6VVB1 395 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 C2CD4CQ8TF44 421 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 UBL7Q96S82 380 aaPredicted RBP9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CD93Q9NPY3 652 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 HRASLS2Q9NWW9 162 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SIGLEC7Q9Y286 467 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 CA5BQ9Y2D0 317 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 SESN1Q9Y6P5 492 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 HLA-DPB1P04440 258 aa9.97□□□□□ -0.81
SENP3-EIF4A1-201ENST00000614237 M6PRP20645 277 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms