RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 LYSMD4Q5XG99 296 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 CD163Q86VB7 1156 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 PRR22Q8IZ63 422 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 ZNF808Q8N4W9 903 aaPredicted RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 HRASLS5Q96KN8 279 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 C1orf198Q9H425 327 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 LIN7BQ9HAP6 207 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 LRP5LA4QPB2 252 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 K7EPK0 472 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 FADS1O60427 444 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 LDB3O75112 727 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 KCNK2O95069 426 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 ARSAP15289 507 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 CPT2P23786 658 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 GDF1P27539 372 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 C21orf33P30042 268 aaPredicted RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 GPR155Q7Z3F1 870 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 PTRH1Q86Y79 214 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 FAM71E2Q8N5Q1 922 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 ADOQ96SZ5 270 aa16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 NXT1Q9UKK6 140 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-206ENST00000613459 TRBV11-1A0A0K0K1C0 115 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 SULT1B1O43704 296 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 ITGB2P05107 769 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 ARG2P78540 354 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC35D3Q5M8T2 416 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 KCTD11Q693B1 232 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 FRMD1Q8N878 549 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 KCNG3Q8TAE7 436 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 PSMF1Q92530 271 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 VN1R3Q9BXE9 311 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.18
HMGXB3-206ENST00000613459 STK17BO94768 372 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC35A1P78382 337 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 TNK1Q13470 666 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC22A6Q4U2R8 563 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 MANEAQ5SRI9 462 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 MRPL2Q5T653 305 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 AVPI1Q5T686 147 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 ADAMTSL4Q6UY14 1074 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 MOB3CQ70IA8 216 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 OR13F1Q8NGS4 319 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SDSLQ96GA7 329 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 UHRF2Q96PU4 802 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 RBFOX1Q9NWB1 397 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 NPIPA5A0A0B4J1W7 369 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 NPIPA7E9PJI5 369 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 GFRA2O00451 464 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 NPIPA8P0DM63 369 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SEC61A1P61619 476 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SYPL1Q16563 259 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 HIST2H3PS2Q5TEC6 136 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 NKX3-1Q99801 234 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 WASH6PQ9NQA3 447 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 MMACHCQ9Y4U1 282 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 TNFRSF10AO00220 468 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 AP1G1O43747 822 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SDC3O75056 442 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 ZNF780AO75290 641 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SCGB1D1O95968 90 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 PSMB1P20618 241 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC1A3P43003 542 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 CTBSQ01459 385 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 TLE4Q04727 773 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 HSF5Q4G112 596 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 SLX4IPQ5VYV7 408 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 UGT2A1Q9Y4X1 527 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 CORINQ9Y5Q5 1042 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 CEBPZOSA8MTT3 80 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 EXOSC7Q15024 291 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 Q499Y3 187 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 ZNF684Q5T5D7 378 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 NRARPQ7Z6K4 114 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 TMEM38AQ9H6F2 299 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 KCNIP2Q9NS61 270 aa16.2■□□□□ 0.18
HMGXB3-206ENST00000613459 LRIT2A6NDA9 550 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 AGAP14A8MT82 685 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 NTHL1P78549 312 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 AARDQ4LEZ3 155 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 VASNQ6EMK4 673 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 BRICD5Q6PL45 260 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 RBMS3Q6XE24 437 aaKnown RBP16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 ZNF761Q86XN6 746 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 PRR18Q8N4B5 295 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC6A18Q96N87 628 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 TRAV36DV7A0A075B6V5 113 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 OR5K3A6NET4 321 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 MSTNO14793 375 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 ZNF44P15621 663 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 SIRPAP78324 504 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 FAM180BQ6P0A1 224 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 CREB3L2Q70SY1 520 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 NDUFAF7Q7L592 441 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 PPP1R3BQ86XI6 285 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 NKAIN3Q8N8D7 197 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 DAZAP1Q96EP5 407 aaKnown RBP16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 SLC46A1Q96NT5 459 aa16.19■□□□□ 0.18
HMGXB3-206ENST00000613459 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms