RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 PER3P56645 1201 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 FBXW4P57775 412 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 DUSP8Q13202 625 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 KCNAB1Q14722 419 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ITPRIPL2Q3MIP1 535 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 SLC38A6Q8IZM9 456 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 GALNT11Q8NCW6 608 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 TOR1AIP2Q8NFQ8 470 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 CES1P1Q9UKY3 287 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ZNF593O00488 134 aaPredicted RBP12.72□□□□□ -0.37
HPS1-215ENST00000613394 GTF2F2P13984 249 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 RAD52P43351 418 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ARL4DP49703 201 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ACTA2P62736 377 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ACTG2P63267 376 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 ZIC1Q15915 447 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 SCGB2B2Q4G0G5 96 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 SMUG1Q53HV7 270 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 CD200R1LQ6Q8B3 271 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 TEX261Q6UWH6 196 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
HPS1-215ENST00000613394 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 OR11H4Q8NGC9 324 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 MOSPD2Q8NHP6 518 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 BRIX1Q8TDN6 353 aaKnown RBP12.72□□□□□ -0.37
HPS1-215ENST00000613394 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 MED30Q96HR3 178 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 DGAT2Q96PD7 388 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 MRPS18AQ9NVS2 196 aaKnown RBP12.72□□□□□ -0.37
HPS1-215ENST00000613394 FARSAQ9Y285 508 aaKnown RBP12.72□□□□□ -0.37
HPS1-215ENST00000613394 U3KQ87 197 aa12.72□□□□□ -0.37
HPS1-215ENST00000613394 TRAV18A0A075B6X5 111 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 LINC01553A4QN01 128 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 CT62P0C5K7 136 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 ZNF136P52737 540 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 KIAA1024LP59773 190 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 PCGF3Q3KNV8 242 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 YIPF5Q969M3 257 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 RPP25Q9BUL9 199 aaKnown RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 MEPEQ9NQ76 525 aaPredicted RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 COPZ2Q9P299 210 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 V9GY05 133 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 A0A1B0GVI7 797 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 CLDN4O14493 209 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 ADRB1P08588 477 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 SRMP19623 302 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 ZNF85Q03923 595 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 FAM181AQ8N9Y4 354 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 MMABQ96EY8 250 aaPredicted RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 EXO5Q9H790 373 aa12.71□□□□□ -0.37
HPS1-215ENST00000613394 C19orf53Q9UNZ5 99 aaPredicted RBP12.71□□□□□ -0.37
HPS1-215ENST00000613394 MDC1Q14676 2089 aaKnown RBP12.71□□□□□ -0.38
HPS1-215ENST00000613394 RANBP2P49792 3224 aaKnown RBP12.71□□□□□ -0.38
HPS1-215ENST00000613394 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 CDC14CA4D256 554 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 XKRYO14609 159 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 RBBP9O75884 186 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 ANKRD34CP0C6C1 535 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 DCTDP32321 178 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 ART1P52961 327 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 ZNF658BQ4V348 819 aaPredicted RBP12.71□□□□□ -0.38
HPS1-215ENST00000613394 OR52B4Q8NGK2 314 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 DVL3Q92997 716 aaPredicted RBP12.71□□□□□ -0.38
HPS1-215ENST00000613394 COMMD4Q9H0A8 199 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 C14orf105Q9NVL8 296 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.38
HPS1-215ENST00000613394 BHLHE40O14503 412 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 TFPIP10646 304 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 PLA1AQ53H76 456 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
HPS1-215ENST00000613394 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 NRIP3Q9NQ35 241 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 LRIT1Q9P2V4 623 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 GRHPRQ9UBQ7 328 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 SLC25A12O75746 678 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 SPDEFO95238 335 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 TACSTD2P09758 323 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 CCKBRP32239 447 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 FAUP35544 74 aaKnown RBP12.7□□□□□ -0.38
HPS1-215ENST00000613394 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
HPS1-215ENST00000613394 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 CD276Q5ZPR3 534 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 SLC35D2Q76EJ3 337 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 COMMD2Q86X83 199 aa12.7□□□□□ -0.38
HPS1-215ENST00000613394 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms