RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 M0R296 226 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 OGG1O15527 345 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 DUX1O43812 170 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 TFPIP10646 304 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 EMDP50402 254 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 AGFG1P52594 562 aaKnown RBP13.47□□□□□ -0.25
CDH1-213ENST00000612417 GPR176Q14439 515 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 ZNF141Q15928 474 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 Q5BKY6 102 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 BICRALQ6AI39 1079 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 PYHIN1Q6K0P9 492 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 SYS1Q8N2H4 156 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 OR5J2Q8NH18 312 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 GRPEL2Q8TAA5 225 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 PTCHD1Q96NR3 888 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 GON7Q9BXV9 100 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 RPRD1BQ9NQG5 326 aaKnown RBP13.47□□□□□ -0.25
CDH1-213ENST00000612417 ACOXLQ9NUZ1 547 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 ING3Q9NXR8 418 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 EPHA6Q9UF33 1036 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 MAU2Q9Y6X3 613 aa13.47□□□□□ -0.25
CDH1-213ENST00000612417 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 A6NL46 340 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 NPIPB9F8W1W9 429 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 LANCL1O43813 399 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 OR10H2O60403 315 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 SERPINA3P01011 423 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 IGKV1D-16P01601 117 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 CD1AP06126 327 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 GIMD1P0DJR0 217 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 PYCR1P32322 319 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 RAB25P57735 213 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ACTA2P62736 377 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ACTG2P63267 376 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 DBPQ10586 325 aaPredicted RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 FGFBP1Q14512 234 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 KCNAB1Q14722 419 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 HLA-BQ31612 363 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ACSM3Q53FZ2 586 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 C6orf183Q5T699 404 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ULK3Q6PHR2 472 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 IL20RBQ6UXL0 311 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 SSX6Q7RTT6 188 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ZNF550Q7Z398 422 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 PLCZ1Q86YW0 608 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 PLXDC1Q8IUK5 500 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 TRMT10AQ8TBZ6 339 aaKnown RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 GHSRQ92847 366 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ARSGQ96EG1 525 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 RAB33BQ9H082 229 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ZCCHC4Q9H5U6 513 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.46□□□□□ -0.25
CDH1-213ENST00000612417 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 ICAM5Q9UMF0 924 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 HEATR5AQ86XA9 2040 aa13.46□□□□□ -0.25
CDH1-213ENST00000612417 PAHP00439 452 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 OR2T7P0C7T2 308 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 UBL4AP11441 157 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 RAB3BP20337 219 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 AHCYP23526 432 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 EPHA8P29322 1005 aaPredicted RBP13.46□□□□□ -0.26
CDH1-213ENST00000612417 GPR3P46089 330 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 SKP1P63208 163 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 RPTNQ6XPR3 784 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 CMIPQ8IY22 773 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 ZNF614Q8N883 585 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 OR2T27Q8NH04 317 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 SMIM19Q96E16 107 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 VSTM2LQ96N03 204 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 GTPBP2Q9BX10 602 aaKnown RBP13.46□□□□□ -0.26
CDH1-213ENST00000612417 MCUBQ9NWR8 336 aa13.46□□□□□ -0.26
CDH1-213ENST00000612417 FRYLO94915 3013 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 ANKRD34BA5PLL1 514 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 ANKRD61A6NGH8 418 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 HYAL3O43820 417 aaPredicted RBP13.45□□□□□ -0.26
CDH1-213ENST00000612417 NDUFB2O95178 105 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 TFP02787 698 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 GYPBP06028 91 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 ACVR1BP36896 505 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
CDH1-213ENST00000612417 DTWD2Q8NBA8 298 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 AKAP1Q92667 903 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH1-213ENST00000612417 CCDC74AQ96AQ1 378 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
CDH1-213ENST00000612417 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 DUSP23Q9BVJ7 150 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 RBCK1Q9BYM8 510 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
CDH1-213ENST00000612417 ABCG5Q9H222 651 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 HCN3Q9P1Z3 774 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 WDR87Q6ZQQ6 2873 aa13.45□□□□□ -0.26
CDH1-213ENST00000612417 A0A1B0GTQ1 180 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms