RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CYB5AP00167 134 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PLATP00750 562 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PDGFAP04085 211 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 OR2T7P0C7T2 308 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GP1BBP13224 206 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ANXA7P20073 488 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NPR2P20594 1047 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PRKACBP22694 351 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 BLKP51451 505 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GLYR1Q49A26 553 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 TCTE1Q5JU00 501 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 AGBL4Q5VU57 503 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 C3P1Q6ZMU1 363 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NUP54Q7Z3B4 507 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GALNT11Q8NCW6 608 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 OR2T27Q8NH04 317 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 CCDC107Q8WV48 283 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 RLN3Q8WXF3 142 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NKX3-1Q99801 234 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 RNF32Q9H0A6 362 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NRIP3Q9NQ35 241 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 MAN2C1Q9NTJ4 1040 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 LSM2Q9Y333 95 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KANTRA0A1W2PQU2 76 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ACOT7O00154 380 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SDC3O75056 442 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 AHSA1O95433 338 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 AMY2AP04746 511 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 APEHP13798 732 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 UBE2MP61081 183 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PPP2CBP62714 309 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PPP2CAP67775 309 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GALK2Q01415 458 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GRK1Q15835 563 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 BEX5Q5H9J7 111 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GARNL3Q5VVW2 1013 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 RPL22L1Q6P5R6 122 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 LRRN1Q6UXK5 716 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SHISA6Q6ZSJ9 500 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 AVL9Q8NBF6 648 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 OR4N2Q8NGD1 307 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM106AQ96A25 262 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KLHDC7BQ96G42 594 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SLX1AQ9BQ83 275 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 TSPAN10Q9H1Z9 355 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KIR3DX1Q9H7L2 352 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GDE1Q9NZC3 331 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 DHDHQ9UQ10 334 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF281Q9Y2X9 895 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 CENPVL1A0A0U1RR11 272 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 LANCL1O43813 399 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KCNJ13O60928 360 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 THEGLP0DJG4 465 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SRMP19623 302 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PRSS3P35030 304 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 LIMS1P48059 325 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PXNP49023 591 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KIAA1024LP59773 190 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 BTN1A1Q13410 526 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ARFRP1Q13795 201 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ARHGAP11BQ3KRB8 267 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 C1orf189Q5VU69 101 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 OR7E24Q6IFN5 339 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 BAIAP2L2Q6UXY1 529 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 BEST3Q8N1M1 668 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF680Q8NEM1 530 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 GPR148Q8TDV2 347 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 C15orf40Q8WUR7 153 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 DVL3Q92997 716 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SIGLEC11Q96RL6 698 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 C20orf85Q9H1P6 137 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PLEKHA1Q9HB21 404 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ISYNA1Q9NPH2 558 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 CYSLTR2Q9NS75 346 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 TAS2R3Q9NYW6 316 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 KLK11Q9UBX7 282 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 PRODH2Q9UF12 536 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SCP2D1Q9UJQ7 156 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 C19orf53Q9UNZ5 99 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 NPFFR2Q9Y5X5 522 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 DOCK4Q8N1I0 1966 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 HTTP42858 3142 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 SPAG17Q6Q759 2223 aa6.33□□□□□ -1.4
SYNPO2-206ENST00000610556 A0A0J9YY10 115 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 A0A1W2PPV9 198 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 C17orf105B2RV13 164 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM229AB2RXF0 380 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 IDSB3KWA1 339 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PRAMEF2O60811 474 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 LILRB5O75023 590 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 APBB3O95704 486 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ATP1B1P05026 303 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ATF1P18846 271 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 MAOAP21397 527 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 S1PR1P21453 382 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms