RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 H7C2Y5 167 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 IFNA5P01569 189 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 ALDOBP05062 364 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 LIPCP11150 499 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 POU3F2P20265 443 aaPredicted RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 POLR2HP52434 150 aaKnown RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 AKR1C2P52895 323 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 ZNF616Q08AN1 781 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 TMEM176BQ3YBM2 270 aaPredicted RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 HSF5Q4G112 596 aaPredicted RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 HBMQ6B0K9 141 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 NDUFAF7Q7L592 441 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 DPY19L4Q7Z388 723 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 CLDN22Q8N7P3 220 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 FAM83FQ8NEG4 500 aaPredicted RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 KCTD12Q96CX2 325 aaKnown RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 DUS3LQ96G46 650 aaKnown RBP13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 MCOLN1Q9GZU1 580 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 OR10A2Q9H208 303 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC22A7Q9Y694 548 aa13.21□□□□□ -0.3
PCDHB16-201ENST00000609684 OR5K3A6NET4 321 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 ETHE1O95571 254 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CTSLP07711 333 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 S100A2P29034 98 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CXADRP78310 365 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 RIPPLY1Q0D2K3 151 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 ECH1Q13011 328 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CTU2Q2VPK5 515 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 BHLHA9Q7RTU4 235 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CHPT1Q8WUD6 406 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 C6orf106Q9H6K1 298 aaPredicted RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 NOX3Q9HBY0 568 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 B3GALT1Q9Y5Z6 326 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 WDPCPO95876 746 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 RAB40ALP0C0E4 278 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 AFF3P51826 1226 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC35A2P78381 396 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 FOXK1P85037 733 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 PRAMEF20Q5VT98 475 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 RAB40AQ8WXH6 277 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SNAPC3Q92966 411 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC41A2Q96JW4 573 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 OR52A5Q9H2C5 316 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 MOKQ9UQ07 419 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 A0A1B0GTW7 788 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SPDEFO95238 335 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 LGI1O95970 557 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 AGBL5Q8NDL9 886 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 ZNF578Q96N58 590 aaPredicted RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 ULBP2Q9BZM5 246 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 POU2F3Q9UKI9 436 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 EFCAB7A8K855 629 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 H3BUI4 141 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 CLEC2LP0C7M8 214 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 HOXB9P17482 250 aaPredicted RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC19A1P41440 591 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SNRPGP62308 76 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 ABHD4Q8TB40 342 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 FOXRED1Q96CU9 486 aaPredicted RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 OR6C1Q96RD1 312 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 LYRM4Q9HD34 91 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 MCTS1Q9ULC4 181 aaKnown RBP13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 SLC6A14Q9UN76 642 aa13.2□□□□□ -0.3
PCDHB16-201ENST00000609684 RFPL3O75679 317 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 LIX1LQ8IVB5 337 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 ZSCAN1Q8NBB4 408 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 RADILQ96JH8 1075 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 EIF5A2Q9GZV4 153 aaKnown RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 CHST8Q9H2A9 424 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 KCNIP1Q9NZI2 227 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 PISDQ9UG56 409 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 LCMT2O60294 686 aaKnown RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 CER1O95813 267 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 CYCSP99999 105 aaKnown RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 FAM219BQ5XKK7 198 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 ELP2Q6IA86 826 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 SFXN4Q6P4A7 337 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 METAP1DQ6UB28 335 aaPredicted RBP13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 ZNF511Q8NB15 262 aa13.19□□□□□ -0.3
PCDHB16-201ENST00000609684 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms