RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PHYHIPLQ96FC7 376 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 SLC41A3Q96GZ6 507 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 SH3YL1Q96HL8 342 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 SENP8Q96LD8 212 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF607Q96SK3 696 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 CCT7Q99832 543 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 NAT10Q9H0A0 1025 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 GLIPR2Q9H4G4 154 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF385DQ9H6B1 395 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ISG20L2Q9H9L3 353 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 NUDT15Q9NV35 164 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 HYPKQ9NX55 129 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 B3GNT2Q9NY97 397 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 WARS2Q9UGM6 360 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 MRPS33Q9Y291 106 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 STK38LQ9Y2H1 464 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF256Q9Y2P7 627 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 EVC2Q86UK5 1308 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 IGHV1OR15-1A0A075B7D0 117 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 C15orf38-AP3S2A0A0A6YYH1 394 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 A0A1B0GWB2 263 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 MBLAC1A4D2B0 266 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 IQCF5A8MTL0 148 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 E7ESA3 106 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RRP8O43159 456 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 HCN1O60741 890 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 UQCRFS1P1P0C7P4 283 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 DNAH10OSP0CZ25 163 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RNH1P13489 461 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 HTR2BP41595 481 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 PPT1P50897 306 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF45Q02386 682 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SRSF5Q13243 272 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF79Q15937 498 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 BCL2A1Q16548 175 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 KLHL40Q2TBA0 621 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 TTC23Q5W5X9 447 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 ATL3Q6DD88 541 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 CLEC6AQ6EIG7 209 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 MOB3BQ86TA1 216 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF589Q86UQ0 364 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SLC38A6Q8IZM9 456 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 OR2L5Q8NG80 312 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 OR8J1Q8NGP2 316 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 TRMT10AQ8TBZ6 339 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 PAQR8Q8TEZ7 354 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 TCTEX1D2Q8WW35 142 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 MARC2Q969Z3 335 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 ISG20Q96AZ6 181 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SGK3Q96BR1 496 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 EFHD2Q96C19 240 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RASD2Q96D21 266 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 IFT74Q96LB3 600 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 AMDHD1Q96NU7 426 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SMIM14Q96QK8 99 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 NICN1Q9BSH3 213 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RNF126Q9BV68 326 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SPATA16Q9BXB7 569 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SRXN1Q9BYN0 137 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 NSRP1Q9H0G5 558 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RHBGQ9H310 441 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 VCX3BQ9H321 246 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 METTL7AQ9H8H3 244 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SLC17A5Q9NRA2 495 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 PLSCR3Q9NRY6 295 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 KLHL28Q9NXS3 571 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 PEF1Q9UBV8 284 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 CD300AQ9UGN4 299 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 KIAA1257Q9ULG3 409 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 RPH3ALQ9UNE2 315 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 SCML2Q9UQR0 700 aa3.04□□□□□ -1.92
SMCHD1-213ENST00000609587 A0A075B6Q4 140 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 LOC100506127A0A0U1RQW1 187 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 OR52A4PA6NMU1 304 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 BTN3A3O00478 584 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 RS1O15537 224 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 PRKYO43930 277 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 N4BP1O75113 896 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 LALBAP00709 142 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 AGTP01019 485 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 IL1BP01584 269 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ALOX5P09917 674 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 RALBP11234 206 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 PRPS2P11908 318 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CD1EP15812 388 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 YWHABP31946 246 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 MAGEA1P43355 309 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 PRKXP51817 358 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 ATP5IP56385 69 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CLDN8P56748 225 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 MYL6P60660 151 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 MRPS15P82914 257 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CHRNB3Q05901 458 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 EGFEM1PQ0D2K5 195 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 XRCC4Q13426 336 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 MESDQ14696 234 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 NCF4Q15080 339 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 RCN1Q15293 331 aa3.03□□□□□ -1.92
SMCHD1-213ENST00000609587 CHRNA6Q15825 494 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms