RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 PRDM4Q9UKN5 801 aa14.41□□□□□ -0.1
TUBE1-206ENST00000603722 NUP214P35658 2090 aaPredicted RBP14.41□□□□□ -0.1
TUBE1-206ENST00000603722 TMEM229AB2RXF0 380 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 SHISA9B4DS77 424 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 PDLIM1O00151 329 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 DANCRP0C864 163 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 ARAFP10398 606 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 PPIBP23284 216 aaKnown RBP14.4□□□□□ -0.1
TUBE1-206ENST00000603722 PRKAR1BP31321 381 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 CDK6Q00534 326 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 SPOCK1Q08629 439 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 GABRA6Q16445 453 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 PGGHGQ32M88 737 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 CKAP2Q8WWK9 683 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 GTPBP3Q969Y2 492 aaKnown RBP14.4□□□□□ -0.1
TUBE1-206ENST00000603722 TMEM45BQ96B21 275 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 SF3B5Q9BWJ5 86 aaKnown RBP14.4□□□□□ -0.1
TUBE1-206ENST00000603722 IKZF5Q9H5V7 419 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 CISD1Q9NZ45 108 aaKnown RBP14.4□□□□□ -0.1
TUBE1-206ENST00000603722 SLC25A15Q9Y619 301 aa14.4□□□□□ -0.1
TUBE1-206ENST00000603722 RAI1Q7Z5J4 1906 aaPredicted RBP14.39□□□□□ -0.11
TUBE1-206ENST00000603722 TRBV5-3A0A0A0MS03 114 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 FAM171A2A8MVW0 826 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 NPIPB7O75200 414 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 AHSA1O95433 338 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 LY6G6DO95868 133 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 HEXAP06865 529 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 ETS2P15036 469 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 CDKN1AP38936 164 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 P2RY4P51582 365 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 TMEM225Q6GV28 225 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 OR7E24Q6IFN5 339 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 TMEM108Q6UXF1 575 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 AAED1Q7RTV5 226 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 COMTD1Q86VU5 262 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 KRT73Q86Y46 540 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 ZIC4Q8N9L1 334 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 STK35Q8TDR2 534 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 SLC35B4Q969S0 331 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 MAGEB18Q96M61 343 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 MUS81Q96NY9 551 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 RSPO3Q9BXY4 272 aaPredicted RBP14.39□□□□□ -0.11
TUBE1-206ENST00000603722 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
TUBE1-206ENST00000603722 TMEM45AQ9NWC5 275 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 RPS6KB2Q9UBS0 482 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
TUBE1-206ENST00000603722 M0R1B8 84 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 OVOL3O00110 214 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 AQP1P29972 269 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 IRX1P78414 480 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-206ENST00000603722 SLC25A3Q00325 362 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 SCARB2Q14108 478 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 GLIPR1L2Q4G1C9 344 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 REEP3Q6NUK4 255 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 SLC22A25Q6T423 547 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 KLHL17Q6TDP4 642 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 C17orf78Q8N4C9 275 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 WDR31Q8NA23 367 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 C1orf162Q8NEQ5 155 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-206ENST00000603722 SLC25A36Q96CQ1 311 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 TRMT61AQ96FX7 289 aaKnown RBP14.38□□□□□ -0.11
TUBE1-206ENST00000603722 CPPED1Q9BRF8 314 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-206ENST00000603722 TRAF4Q9BUZ4 470 aaPredicted RBP14.38□□□□□ -0.11
TUBE1-206ENST00000603722 PTDSS2Q9BVG9 487 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 AMBRA1Q9C0C7 1298 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 SLCO5A1Q9H2Y9 848 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 ALG2Q9H553 416 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 NPHS2Q9NP85 383 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 CORO2BQ9UQ03 480 aa14.38□□□□□ -0.11
TUBE1-206ENST00000603722 ACANP16112 2415 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 HEATR5AQ86XA9 2040 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 ELOA3DA6NLF2 546 aaPredicted RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 EVPLLA8MZ36 301 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 FTCDNL1E5RQL4 147 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 VAMP5O95183 116 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 PNMTP11086 282 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 H2AFXP16104 143 aaPredicted RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 CDH2P19022 906 aaPredicted RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 PTAFRP25105 342 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 CD40P25942 277 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 HTR2AP28223 471 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 GTF2E2P29084 291 aaKnown RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 MPGP29372 298 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 RPS5P46782 204 aaKnown RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 SELENOPP49908 381 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 TGFBR3Q03167 851 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 EGR4Q05215 589 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 KRTAP21-3Q3LHN1 58 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 ELOA3BQ3SY89 546 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 DHRS4L2Q6PKH6 230 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 POMGNT2Q8NAT1 580 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 ELOA3Q8NG57 546 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 KTI12Q96EK9 354 aaPredicted RBP14.37□□□□□ -0.11
TUBE1-206ENST00000603722 RADILQ96JH8 1075 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 SPATA5L1Q9BVQ7 753 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 RABEP2Q9H5N1 569 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 TMEM38AQ9H6F2 299 aa14.37□□□□□ -0.11
TUBE1-206ENST00000603722 SLC17A5Q9NRA2 495 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms