RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 CDC42EP2O14613 210 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 TLX2O43763 284 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CCL3P10147 92 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 PRKAR1AP10644 381 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 PEPDP12955 493 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ATP6V1B1P15313 513 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ZNF17P17021 662 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ZNF3P17036 446 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CRHBPP24387 322 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 DPP4P27487 766 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ELK4P28324 431 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CLN3Q13286 438 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ZNF74Q16587 644 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 OCLNQ16625 522 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 PLPPR5Q32ZL2 321 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 KLHL22Q53GT1 634 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 TMEM236Q5W0B7 351 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 B3GNTL1Q67FW5 361 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-210ENST00000600442 BICRALQ6AI39 1079 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 ZNF773Q6PK81 442 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 GID4Q8IVV7 300 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 LNX2Q8N448 690 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 FAM26EQ8N5C1 309 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 TCEANCQ8N8B7 351 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 OR13C2Q8NGS9 318 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CNIH3Q8TBE1 160 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 TMEM163Q8TC26 289 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 PSMF1Q92530 271 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 MYCBPQ99417 103 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-210ENST00000600442 PIGQQ9BRB3 760 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CCDC90BQ9GZT6 254 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 RNF32Q9H0A6 362 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 UBQLN3Q9H347 655 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 FN3KQ9H479 309 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 GPR83Q9NYM4 423 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 KLHL21Q9UJP4 597 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 VDAC3Q9Y277 283 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 SIGLEC7Q9Y286 467 aa11.56□□□□□ -0.56
ZNF548-210ENST00000600442 KLF13Q9Y2Y9 288 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-210ENST00000600442 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CLCA1A8K7I4 914 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 BLOC1S5-TXNDC5H3BN57 136 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 EFSO43281 561 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 RGS10O43665 173 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 MAN1A2O60476 641 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 PTP4A3O75365 173 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 SMNDC1O75940 238 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 APEHP13798 732 aaKnown RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 TTKP33981 857 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 IDUAP35475 653 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CD96P40200 585 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 PTGDSP41222 190 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 ARG2P78540 354 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 LGALS3BPQ08380 585 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CDC20Q12834 499 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 NFATC3Q12968 1075 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 SELENBP1Q13228 472 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 MFAP5Q13361 173 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 TUBA3CQ13748 450 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 OR1C1Q15619 314 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 TOMM34Q15785 309 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 GPR139Q6DWJ6 353 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 TUBA3EQ6PEY2 450 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 Q6ZPB1 254 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 LINC00696Q6ZRV3 163 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 MEX3DQ86XN8 651 aaKnown RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 ADGRG3Q86Y34 549 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 KIF18BQ86Y91 864 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 STX19Q8N4C7 294 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 WDSUB1Q8N9V3 476 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 MFSD8Q8NHS3 518 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 TNFRSF13CQ96RJ3 184 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 IL4I1Q96RQ9 567 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 ZFP64Q9NPA5 681 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CHCHD3Q9NX63 227 aaKnown RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 ANKRD10Q9NXR5 420 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 CNOT2Q9NZN8 540 aaKnown RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 MRPS18CQ9Y3D5 142 aaKnown RBP11.55□□□□□ -0.56
ZNF548-210ENST00000600442 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
ZNF548-210ENST00000600442 IGKV1D-42A0A075B6H8 117 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 OR5H15A6NDH6 313 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 A6NL46 340 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 IMPA2O14732 288 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 SURF4O15260 269 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 NKX2-8O15522 239 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 PRODHO43272 600 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 TRIM3O75382 744 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-210ENST00000600442 PTNP21246 168 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 MST1P26927 711 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 ACVR2AP27037 513 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 SRD5A2P31213 254 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 FMO3P31513 532 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 ATP6V1E1P36543 226 aa11.54□□□□□ -0.56
ZNF548-210ENST00000600442 RPS5P46782 204 aaKnown RBP11.54□□□□□ -0.56
ZNF548-210ENST00000600442 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
ZNF548-210ENST00000600442 MVKQ03426 396 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms